RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 A0A1W2PQ45 241 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 A0A1W2PQY0 241 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 MOXD2PA6NHM9 499 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 KLRF2D3W0D1 207 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 BMP8BP34820 402 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 ACLYP53396 1101 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 RPS6P62753 249 aaKnown RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 WTAPQ15007 396 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 KCNA10Q16322 511 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 TRIM60Q495X7 471 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 GNASQ5JWF2 1037 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 SLC30A10Q6XR72 485 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 FBXO16Q8IX29 292 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 PCSK9Q8NBP7 692 aaKnown RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 VTI1AQ96AJ9 217 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 UBE2OQ9C0C9 1292 aaKnown RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 KATNBL1Q9H079 304 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 TAF6LQ9Y6J9 622 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 DDX49Q9Y6V7 483 aaKnown RBP14.41□□□□□ -0.1
SHMT2-214ENST00000554604 ABCB11O95342 1321 aa14.41□□□□□ -0.1
SHMT2-214ENST00000554604 LOC102724159A0A0B4J2E5 919 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 B4DLN1 442 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 ADCY6O43306 1168 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 ALDH5A1P51649 535 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-214ENST00000554604 MRPL12P52815 198 aaKnown RBP14.4□□□□□ -0.1
SHMT2-214ENST00000554604 GJA9P57773 515 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 CUL4AQ13619 759 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 SNX17Q15036 470 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 PWP2Q15269 919 aaKnown RBP14.4□□□□□ -0.1
SHMT2-214ENST00000554604 QRICH1Q2TAL8 776 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 C1orf53Q5VUE5 145 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 IQSEC1Q6DN90 963 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 STOX1Q6ZVD7 989 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 FBXO11Q86XK2 927 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 STAG2Q8N3U4 1231 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 KLHDC9Q8NEP7 349 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 GLT1D1Q96MS3 346 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 TM6SF1Q9BZW5 370 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 UPF3AQ9H1J1 476 aaKnown RBP14.4□□□□□ -0.1
SHMT2-214ENST00000554604 VTA1Q9NP79 307 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 STARD7Q9NQZ5 370 aa14.4□□□□□ -0.1
SHMT2-214ENST00000554604 LTBP2Q14767 1821 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 LAMA3Q16787 3333 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-214ENST00000554604 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 CST5P28325 142 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-214ENST00000554604 MCM4P33991 863 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 TLE2Q04725 743 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 PDE4DQ08499 809 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 NECTIN1Q15223 517 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 CATIPQ7Z7H3 387 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 TLK2Q86UE8 772 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 MCF2L2Q86YR7 1114 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 DNERQ8NFT8 737 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 JMJD4Q9H9V9 463 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 PDGFCQ9NRA1 345 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 MRPL11Q9Y3B7 192 aaKnown RBP14.39□□□□□ -0.11
SHMT2-214ENST00000554604 KIAA1217Q5T5P2 1943 aa14.39□□□□□ -0.11
SHMT2-214ENST00000554604 SZT2Q5T011 3432 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 PQBP1O60828 265 aaKnown RBP14.38□□□□□ -0.11
SHMT2-214ENST00000554604 ASGR1P07306 291 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-214ENST00000554604 NUCB2P80303 420 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 CCSAPQ6IQ19 270 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-214ENST00000554604 TAPT1Q6NXT6 567 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 RGS22Q8NE09 1264 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 MORC4Q8TE76 937 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 INTS4Q96HW7 963 aaKnown RBP14.38□□□□□ -0.11
SHMT2-214ENST00000554604 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 MAF1Q9H063 256 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 MAD2L2Q9UI95 211 aa14.38□□□□□ -0.11
SHMT2-214ENST00000554604 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-214ENST00000554604 DDX11L8A8MPP1 907 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 DCDC2CA8MYV0 355 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 DYNC1LI2O43237 492 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-214ENST00000554604 ZEB2O60315 1214 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 SMPD1P17405 629 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 PTMSP20962 102 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 MCM5P33992 734 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 BEX3Q00994 111 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 GRM4Q14833 912 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 FSCN1Q16658 493 aaKnown RBP14.37□□□□□ -0.11
SHMT2-214ENST00000554604 RNF20Q5VTR2 975 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 MB21D2Q8IYB1 491 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-214ENST00000554604 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 TDHQ8IZJ6 230 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
SHMT2-214ENST00000554604 GBP4Q96PP9 640 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 WDR11Q9BZH6 1224 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 SENP2Q9HC62 589 aa14.37□□□□□ -0.11
SHMT2-214ENST00000554604 PDLIM7Q9NR12 457 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms