RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CRHR2Q13324 411 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 COL19A1Q14993 1142 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 DLGAP5Q15398 846 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 FXNQ16595 210 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 CT47A1Q5JQC4 288 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 BEND3Q5T5X7 828 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 C17orf99Q6UX52 265 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MOB2Q70IA6 237 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TXNRD3Q86VQ6 643 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 IQCF2Q8IXL9 164 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 SMAP1Q8IYB5 467 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 BEND7Q8N7W2 519 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TBC1D22AQ8WUA7 517 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 IPCEF1Q8WWN9 437 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 NANOS1Q8WY41 292 aaKnown RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 GOLGA1Q92805 767 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 E2F7Q96AV8 911 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MRGPRX2Q96LB1 330 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ZDHHC15Q96MV8 337 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ZFYVE28Q9HCC9 887 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF70Q9UC06 446 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TBK1Q9UHD2 729 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 SIPA1L1O43166 1804 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 LTBP2Q14767 1821 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ATRNL1Q5VV63 1379 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MYH2Q9UKX2 1941 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 A0A0G2JMZ2 1700 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MAST3O60307 1309 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MROH5Q6ZUA9 1318 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 A0A1W2PRQ8 180 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ANKRD18BA2A2Z9 1011 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 PIP5K1CO60331 668 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TLR2O60603 784 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MYL3P08590 195 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 CCDC175P0C221 793 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 CETPP11597 493 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 HOXC13P31276 330 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 WNT7BP56706 349 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 FANCCQ00597 558 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 GRM1Q13255 1194 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MOGSQ13724 837 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 WDR43Q15061 677 aaKnown RBP eCLIP3.14□□□□□ -1.919e-15■□□□□ 10.1
PRPF39-206ENST00000554429 PPP2R5AQ15172 486 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 CFAP100Q494V2 611 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 JAKMIP3Q5VZ66 844 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ERAP2Q6P179 960 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF449Q6P9G9 518 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 HHIPL2Q6UWX4 724 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ANKRD13BQ86YJ7 626 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 VGLL2Q8N8G2 317 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 DNAAF4Q8WXU2 420 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 SHISA4Q96DD7 197 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 PDCL3Q9H2J4 239 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 PRKRIP1Q9H875 184 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 EFCC1Q9HA90 598 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TRMT1Q9NXH9 659 aaKnown RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 PPP4R2Q9NY27 417 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ANGEL1Q9UNK9 670 aaKnown RBP3.14□□□□□ -1.91
PRPF39-206ENST00000554429 PI4KAP2A4QPH2 592 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TSPAN6O43657 245 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 KIF5CO60282 957 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 XBP1P17861 261 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TSPAN7P41732 249 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 CAP1Q01518 475 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 PPATQ06203 517 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 CCDC15Q0P6D6 951 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 PTK7Q13308 1070 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 MYSM1Q5VVJ2 828 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ANO1Q5XXA6 986 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 CCSAPQ6IQ19 270 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 C16orf54Q6UWD8 224 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TBC1D9Q6ZT07 1266 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ERO1BQ86YB8 467 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 MCF2L2Q86YR7 1114 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF713Q8N859 430 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 PI4KAP1Q8N8J0 262 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TEX19Q8NA77 164 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 CD99L2Q8TCZ2 262 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 PXYLP1Q8TE99 480 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 JPH3Q8WXH2 748 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 BRI3BPQ8WY22 251 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 HOMER2Q9NSB8 354 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 SUN2Q9UH99 717 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ODF2LQ9ULJ1 636 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 MAFFQ9ULX9 164 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ITM2BQ9Y287 266 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TRIM17Q9Y577 477 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 MAFBQ9Y5Q3 323 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 SNCAIPQ9Y6H5 919 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 DPYSL4O14531 572 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 VAMP4O75379 141 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 SCGB1D2O95969 90 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 GLULP15104 373 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 EPB42P16452 691 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 FGFR2P21802 821 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 KLRK1P26718 216 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 GJA8P48165 433 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 GTF2IP78347 998 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms