RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
NEDD1-206ENST00000554226 ARHGEF15O94989 841 aa16.49■□□□□ 0.23
NEDD1-206ENST00000554226 PTGS1P23219 599 aa16.49■□□□□ 0.23
NEDD1-206ENST00000554226 FBXO16Q8IX29 292 aaPredicted RBP16.49■□□□□ 0.23
NEDD1-206ENST00000554226 APPBP2Q92624 585 aa16.49■□□□□ 0.23
NEDD1-206ENST00000554226 TRERF1Q96PN7 1200 aa16.49■□□□□ 0.23
NEDD1-206ENST00000554226 TRMT13Q9NUP7 481 aaKnown RBP16.49■□□□□ 0.23
NEDD1-206ENST00000554226 RBM47A0AV96 593 aaKnown RBP16.48■□□□□ 0.23
NEDD1-206ENST00000554226 MS4A1P11836 297 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 HERC6Q8IVU3 1022 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 KBTBD3Q8NAB2 608 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 CD320Q9NPF0 282 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 LMCD1Q9NZU5 365 aa16.48■□□□□ 0.23
NEDD1-206ENST00000554226 LPXNO60711 386 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 PRDM1O75626 825 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 BAIAP3O94812 1187 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
NEDD1-206ENST00000554226 CYP2C9P11712 490 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 CPT1AP50416 773 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
NEDD1-206ENST00000554226 GRB10Q13322 594 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 PPP4R3BQ5MIZ7 849 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 DEFB128Q7Z7B8 93 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 DDX19BQ9UMR2 479 aa16.47■□□□□ 0.23
NEDD1-206ENST00000554226 PRR33A8MZF0 331 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 GPAA1O43292 621 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 IQCF3P0C7M6 154 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 ALAS1P13196 640 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 SLC1A4P43007 532 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 TDO2P48775 406 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 MUM1L1Q5H9M0 696 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 MTG1Q9BT17 334 aaPredicted RBP16.46■□□□□ 0.23
NEDD1-206ENST00000554226 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
NEDD1-206ENST00000554226 ADD3Q9UEY8 706 aaKnown RBP16.46■□□□□ 0.23
NEDD1-206ENST00000554226 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
NEDD1-206ENST00000554226 KIF28PB7ZC32 967 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 KPNA6O60684 536 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 ICAM1P05362 532 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 PDE4BQ07343 736 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 LRRFIP1Q32MZ4 808 aaKnown RBP16.45■□□□□ 0.22
NEDD1-206ENST00000554226 RCSD1Q6JBY9 416 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 EEPD1Q7L9B9 569 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 SPRED2Q7Z698 418 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 WDR11Q9BZH6 1224 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 TRIP12Q14669 1992 aaPredicted RBP16.45■□□□□ 0.22
NEDD1-206ENST00000554226 SIP14410 1827 aa16.45■□□□□ 0.22
NEDD1-206ENST00000554226 A6NJR5 290 aa16.44■□□□□ 0.22
NEDD1-206ENST00000554226 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
NEDD1-206ENST00000554226 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
NEDD1-206ENST00000554226 NOVP48745 357 aa16.44■□□□□ 0.22
NEDD1-206ENST00000554226 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-206ENST00000554226 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
NEDD1-206ENST00000554226 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.22
NEDD1-206ENST00000554226 MCCP23508 829 aa16.43■□□□□ 0.22
NEDD1-206ENST00000554226 TFAP4Q01664 338 aa16.43■□□□□ 0.22
NEDD1-206ENST00000554226 BFSP2Q13515 415 aa16.43■□□□□ 0.22
NEDD1-206ENST00000554226 NBPF20Q3BBV1 942 aa16.43■□□□□ 0.22
NEDD1-206ENST00000554226 RANBP17Q9H2T7 1088 aaKnown RBP16.43■□□□□ 0.22
NEDD1-206ENST00000554226 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
NEDD1-206ENST00000554226 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
NEDD1-206ENST00000554226 RAD50Q92878 1312 aa16.43■□□□□ 0.22
NEDD1-206ENST00000554226 SLC3A2P08195 630 aaKnown RBP16.42■□□□□ 0.22
NEDD1-206ENST00000554226 EDNRBP24530 442 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 MRE11P49959 708 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 RBL2Q08999 1139 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 IKQ13123 557 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-206ENST00000554226 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-206ENST00000554226 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 NSMFQ6X4W1 530 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 RETREG2Q8NC44 543 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
NEDD1-206ENST00000554226 GPHNQ9NQX3 736 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-206ENST00000554226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEDD1-206ENST00000554226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-206ENST00000554226 M0R2C6 588 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
NEDD1-206ENST00000554226 BAATQ14032 418 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-206ENST00000554226 KCTD1Q719H9 257 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 SESTD1Q86VW0 696 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 FAM178BQ8IXR5 827 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 GJD3Q8N144 294 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 OR6J1Q8NGC5 347 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 AFAP1L1Q8TED9 768 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 GDPD5Q8WTR4 605 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 PURBQ96QR8 312 aaKnown RBP16.41■□□□□ 0.22
NEDD1-206ENST00000554226 UBE2ZQ9H832 354 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-206ENST00000554226 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
NEDD1-206ENST00000554226 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-206ENST00000554226 LCHNA4D1U4 455 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms