RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NECAB1Q8N987 351 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
TUBB3-202ENST00000553656 CUL5Q93034 780 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 GTF3C6Q969F1 213 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 MAML3Q96JK9 1138 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.15
TUBB3-202ENST00000553656 ADD3Q9UEY8 706 aaKnown RBP15.96■□□□□ 0.15
TUBB3-202ENST00000553656 RBBP6Q7Z6E9 1792 aaKnown RBP15.95■□□□□ 0.14
TUBB3-202ENST00000553656 GCOM1H8Y6P7 765 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-202ENST00000553656 LARGE1O95461 756 aa15.95■□□□□ 0.14
TUBB3-202ENST00000553656 POLR2MP0CAP2 368 aa15.95■□□□□ 0.14
TUBB3-202ENST00000553656 WWC2Q6AWC2 1192 aa15.95■□□□□ 0.14
TUBB3-202ENST00000553656 PPP1R18Q6NYC8 613 aa15.95■□□□□ 0.14
TUBB3-202ENST00000553656 ZNF467Q7Z7K2 595 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-202ENST00000553656 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
TUBB3-202ENST00000553656 FAM133AQ8N9E0 248 aa15.95■□□□□ 0.14
TUBB3-202ENST00000553656 CCDC12Q8WUD4 166 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-202ENST00000553656 ARMC5Q96C12 935 aa15.95■□□□□ 0.14
TUBB3-202ENST00000553656 MAP3K20Q9NYL2 800 aaKnown RBP15.95■□□□□ 0.14
TUBB3-202ENST00000553656 B4DLN1 442 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 PPFIA3O75145 1194 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 DEXIO95424 95 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 MRPL12P52815 198 aaKnown RBP15.94■□□□□ 0.14
TUBB3-202ENST00000553656 CNTN2Q02246 1040 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 PSTPIP2Q9H939 334 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 BARHL2Q9NY43 387 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 ZNFX1Q9P2E3 1918 aaKnown RBP15.94■□□□□ 0.14
TUBB3-202ENST00000553656 STK36Q9NRP7 1315 aa15.94■□□□□ 0.14
TUBB3-202ENST00000553656 PLXNA1Q9UIW2 1896 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 ASB14A6NK59 587 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 STXBP3O00186 592 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 MYCP01106 439 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-202ENST00000553656 PRKAR2AP13861 404 aaKnown RBP15.93■□□□□ 0.14
TUBB3-202ENST00000553656 CYP2C19P33261 490 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 HSD17B4P51659 736 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 CCDC83Q8IWF9 413 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 CCDC148Q8NFR7 591 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 SYTL5Q8TDW5 730 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-202ENST00000553656 WASF1Q92558 559 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 ABHD8Q96I13 439 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 TINF2Q9BSI4 451 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 GLT8D2Q9H1C3 349 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 FLRT1Q9NZU1 646 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 SMCHD1A6NHR9 2005 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 SYNGAP1Q96PV0 1343 aa15.93■□□□□ 0.14
TUBB3-202ENST00000553656 LOC102724159A0A0B4J2E5 919 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 SOWAHBA6NEL2 793 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 OPLAHO14841 1288 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 XBP1P17861 261 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 HOXA13P31271 388 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-202ENST00000553656 ALDH5A1P51649 535 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-202ENST00000553656 ADCY7P51828 1080 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 PWP2Q15269 919 aaKnown RBP15.92■□□□□ 0.14
TUBB3-202ENST00000553656 FCHSD1Q86WN1 690 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 DNERQ8NFT8 737 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 NSUN6Q8TEA1 469 aaKnown RBP15.92■□□□□ 0.14
TUBB3-202ENST00000553656 TBC1D5Q92609 795 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 ZNF333Q96JL9 665 aa15.92■□□□□ 0.14
TUBB3-202ENST00000553656 HMX1Q9NP08 348 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-202ENST00000553656 ORC3Q9UBD5 711 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-202ENST00000553656 SMCO2A6NFE2 343 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 GHRHRQ02643 423 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 PKN1Q16512 942 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 ARHGEF16Q5VV41 709 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 MAMDC4Q6UXC1 1216 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 ARMCX2Q7L311 632 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 TEX2Q8IWB9 1127 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 PURBQ96QR8 312 aaKnown RBP15.91■□□□□ 0.14
TUBB3-202ENST00000553656 RMDN3Q96TC7 470 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
TUBB3-202ENST00000553656 TMEM106CQ9BVX2 250 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 C6orf50Q9HD87 102 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 NRBP1Q9UHY1 535 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 RPTORQ8N122 1335 aa15.91■□□□□ 0.14
TUBB3-202ENST00000553656 SPDYE3A6NKU9 549 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 PIK3CDO00329 1044 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 CCL5P13501 91 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 CNGA1P29973 690 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 GNA11P29992 359 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 CACNB2Q08289 660 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-202ENST00000553656 PDE4DQ08499 809 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 TRIM32Q13049 653 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 NSUN7Q8NE18 718 aaKnown RBP15.9■□□□□ 0.14
TUBB3-202ENST00000553656 TMX3Q96JJ7 454 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 FGD4Q96M96 766 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 TAAR1Q96RJ0 339 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 RNF208Q9H0X6 261 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 RIC8AQ9NPQ8 531 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 SH3GLB2Q9NR46 395 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-202ENST00000553656 VPS54Q9P1Q0 977 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 COL20A1Q9P218 1284 aa15.9■□□□□ 0.14
TUBB3-202ENST00000553656 ZHX1Q9UKY1 873 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-202ENST00000553656 ESYT2A0FGR8 921 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 CD2BP2O95400 341 aaKnown RBP15.89■□□□□ 0.13
TUBB3-202ENST00000553656 CTDNEP1O95476 244 aa15.89■□□□□ 0.13
TUBB3-202ENST00000553656 EIF2AK2P19525 551 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms