RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 NSUN2Q08J23 767 aaKnown RBP eCLIP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 FAPQ12884 760 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 GRM1Q13255 1194 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ADAT2Q7Z6V5 191 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 RFWD2Q8NHY2 731 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 AGAP11Q8TF27 550 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 MRPL46Q9H2W6 279 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 MMRN2Q9H8L6 949 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ATP6V0A2Q9Y487 856 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 NPHP3Q7Z494 1330 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 MINK1Q8N4C8 1332 aaPredicted RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 DRP2Q13474 957 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 TOMM20Q15388 145 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 RRAGBQ5VZM2 374 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 SHQ1Q6PI26 577 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 C1orf131Q8NDD1 294 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 LEO1Q8WVC0 666 aaPredicted RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 UBN1Q9NPG3 1134 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 SOWAHDA6NJG2 315 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 NDC80O14777 642 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 NVLO15381 856 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 MYBPC3Q14896 1274 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ANKRD13AQ8IZ07 590 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 DDHD1Q8NEL9 900 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 APPBP2Q92624 585 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 RNPC3Q96LT9 517 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 A1CFQ9NQ94 594 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 TMOD2Q9NZR1 351 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 S100A1P23297 94 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 DDB1Q16531 1140 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 NUGGCQ68CJ6 796 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 GALNT15Q8N3T1 639 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 EEF2KMTQ96G04 330 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ABCC9O60706 1549 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 KRT4P19013 534 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 RXRAP19793 462 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 HDAC4P56524 1084 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ZNF827Q17R98 1081 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ANKRD20A2Q5SQ80 823 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ANKRD20A1Q5TYW2 823 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ANKRD20A3Q5VUR7 823 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 C11orf74Q86VG3 221 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 CALML6Q8TD86 181 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 RNPEPQ9H4A4 650 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 SELENONQ9NZV5 590 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 ITGB1BP2Q9UKP3 347 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 TAF4O00268 1085 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PPP1R37O75864 691 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 CCNFP41002 786 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 DAB2IPQ5VWQ8 1189 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 STKLD1Q8NE28 680 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 SKA1Q96BD8 255 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 STMN4Q9H169 189 aaPredicted RBP9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 TMEM247A6NEH6 219 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 JAK2O60674 1132 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PLCB4Q15147 1175 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 MAK16Q9BXY0 300 aaKnown RBP9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 ATP5JP18859 108 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PNOCQ13519 176 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 RSPH3Q86UC2 560 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 CCDC84Q86UT8 332 aaPredicted RBP9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 NEK9Q8TD19 979 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 ETNK1Q9HBU6 452 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 HOXD12P35452 270 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PATL1Q86TB9 770 aaKnown RBP9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 DDX50Q9BQ39 737 aaKnown RBP9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 BOLA2-SMG1P6H3BVE0 249 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PRC1O43663 620 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 ELF3P78545 371 aaPredicted RBP9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 TMEM132EQ6IEE7 984 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 OSCP1Q8WVF1 389 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 OLFML3Q9NRN5 406 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 ZBTB1Q9Y2K1 713 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
GTF2A1-203ENST00000553612 TIMM44O43615 452 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 RRM1P23921 792 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 LONP1P36776 959 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TMPOP42166 694 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TUBB2AQ13885 445 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 C16orf72Q14CZ0 275 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 METTL24Q5JXM2 366 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TMEM214Q6NUQ4 689 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TTC6Q86TZ1 520 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 C7orf57Q8NEG2 295 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 LENG1Q96BZ8 264 aaPredicted RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TUBB2BQ9BVA1 445 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 PHAXQ9H814 394 aaKnown RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 MLXIPLQ9NP71 852 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 DMAP1Q9NPF5 467 aaPredicted RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 TRIM37O94972 964 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 PRKACBP22694 351 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 ANKRD20A8PQ5CZ79 823 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 PPP4R3AQ6IN85 833 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 SNX32Q86XE0 403 aa9.79□□□□□ -0.84
GTF2A1-203ENST00000553612 STAMQ92783 540 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms