RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 NSMFQ6X4W1 530 aa22.2■■□□□ 1.14
PSEN1-207ENST00000553599 ZNF296Q8WUU4 475 aaPredicted RBP22.2■■□□□ 1.14
PSEN1-207ENST00000553599 SOCS4Q8WXH5 440 aa22.2■■□□□ 1.14
PSEN1-207ENST00000553599 BRMS1Q9HCU9 246 aa22.2■■□□□ 1.14
PSEN1-207ENST00000553599 CYP39A1Q9NYL5 469 aa22.2■■□□□ 1.14
PSEN1-207ENST00000553599 PCDHA4Q9UN74 947 aa22.2■■□□□ 1.14
PSEN1-207ENST00000553599 ZNF236Q9UL36 1845 aa22.2■■□□□ 1.14
PSEN1-207ENST00000553599 DTNBO60941 627 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 CFBP00751 764 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 MMP1P03956 469 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 HOXD10P28358 340 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 SAFBQ15424 915 aaKnown RBP eCLIP22.19■■□□□ 1.14
PSEN1-207ENST00000553599 KRT40Q6A162 431 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 SLC5A4Q9NY91 659 aa22.19■■□□□ 1.14
PSEN1-207ENST00000553599 MGAMO43451 1857 aa22.18■■□□□ 1.14
PSEN1-207ENST00000553599 FOSP01100 380 aaPredicted RBP22.18■■□□□ 1.14
PSEN1-207ENST00000553599 RPS6P62753 249 aaKnown RBP22.18■■□□□ 1.14
PSEN1-207ENST00000553599 BAATQ14032 418 aaPredicted RBP22.18■■□□□ 1.14
PSEN1-207ENST00000553599 MORN1Q5T089 497 aa22.18■■□□□ 1.14
PSEN1-207ENST00000553599 REXO1Q8N1G1 1221 aaKnown RBP22.18■■□□□ 1.14
PSEN1-207ENST00000553599 SHISA4Q96DD7 197 aa22.18■■□□□ 1.14
PSEN1-207ENST00000553599 TRIM47Q96LD4 638 aa22.18■■□□□ 1.14
PSEN1-207ENST00000553599 NUDT12Q9BQG2 462 aa22.18■■□□□ 1.14
PSEN1-207ENST00000553599 PCNTO95613 3336 aa22.18■■□□□ 1.14
PSEN1-207ENST00000553599 PLXNB2O15031 1838 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 DNAJC25-GNG10A0A024R161 153 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 LOC102724159A0A0B4J2E5 919 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 H3BQV1 296 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 MEIS2O14770 477 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 CTCFP49711 727 aaPredicted RBP22.17■■□□□ 1.14
PSEN1-207ENST00000553599 AP3B2Q13367 1082 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 PWP2Q15269 919 aaKnown RBP22.17■■□□□ 1.14
PSEN1-207ENST00000553599 IFFO2Q5TF58 517 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 BLIDQ8IZY5 108 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 SYTL5Q8TDW5 730 aaPredicted RBP22.17■■□□□ 1.14
PSEN1-207ENST00000553599 KCNJ14Q9UNX9 436 aa22.17■■□□□ 1.14
PSEN1-207ENST00000553599 DIS3Q9Y2L1 958 aaKnown RBP22.17■■□□□ 1.14
PSEN1-207ENST00000553599 POTEB2H3BUK9 544 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 HOXC6P09630 235 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 HSPA1AP0DMV8 641 aaKnown RBP22.16■■□□□ 1.14
PSEN1-207ENST00000553599 HSPA1BP0DMV9 641 aaKnown RBP22.16■■□□□ 1.14
PSEN1-207ENST00000553599 ADORA2AP29274 412 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 KRT2P35908 639 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 CLK2P49760 499 aaKnown RBP22.16■■□□□ 1.14
PSEN1-207ENST00000553599 PRMT2P55345 433 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 NPY5RQ15761 445 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 DNERQ8NFT8 737 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 CD99L2Q8TCZ2 262 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 ADD3Q9UEY8 706 aaKnown RBP22.16■■□□□ 1.14
PSEN1-207ENST00000553599 TSKSQ9UJT2 592 aa22.16■■□□□ 1.14
PSEN1-207ENST00000553599 SPDYE3A6NKU9 549 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 SYT1P21579 422 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 CTGFP29279 349 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 RGS2P41220 211 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 MAP2K5Q13163 448 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 USP17L6PQ6QN14 398 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 SLC30A10Q6XR72 485 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 DPP9Q86TI2 863 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 FAM133AQ8N9E0 248 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 SPRYD3Q8NCJ5 442 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 TBC1D5Q92609 795 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 USP6NLQ92738 828 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 ARHGAP39Q9C0H5 1083 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 EHMT1Q9H9B1 1298 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 GJB4Q9NTQ9 266 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 GJD2Q9UKL4 321 aa22.15■■□□□ 1.14
PSEN1-207ENST00000553599 B4DLN1 442 aa22.14■■□□□ 1.13
PSEN1-207ENST00000553599 M0R2N6 131 aa22.14■■□□□ 1.13
PSEN1-207ENST00000553599 FOXN1O15353 648 aa22.14■■□□□ 1.13
PSEN1-207ENST00000553599 HSPA8P11142 646 aaKnown RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 XRCC5P13010 732 aaKnown RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 HOXA13P31271 388 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 ZNF467Q7Z7K2 595 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 DIS3L2Q8IYB7 885 aaKnown RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 IPO9Q96P70 1041 aaKnown RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 MPHOSPH6Q99547 160 aaKnown RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 FOXP1Q9H334 677 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-207ENST00000553599 STX6O43752 255 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 UBE2SQ16763 222 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 ZNF792Q3KQV3 632 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 KRT25Q7Z3Z0 450 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 MSL3Q8N5Y2 521 aaKnown RBP22.13■■□□□ 1.13
PSEN1-207ENST00000553599 NSUN6Q8TEA1 469 aaKnown RBP22.13■■□□□ 1.13
PSEN1-207ENST00000553599 APBA2Q99767 749 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 SRRDQ9UH36 339 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 PCDHA6Q9UN73 950 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 PCDHA8Q9Y5H6 950 aa22.13■■□□□ 1.13
PSEN1-207ENST00000553599 ZNFX1Q9P2E3 1918 aaKnown RBP22.13■■□□□ 1.13
PSEN1-207ENST00000553599 PGK2P07205 417 aa22.12■■□□□ 1.13
PSEN1-207ENST00000553599 FOSBP53539 338 aa22.12■■□□□ 1.13
PSEN1-207ENST00000553599 GUCY1B3Q02153 619 aa22.12■■□□□ 1.13
PSEN1-207ENST00000553599 FCHSD1Q86WN1 690 aa22.12■■□□□ 1.13
PSEN1-207ENST00000553599 TRMT44Q8IYL2 757 aaKnown RBP22.12■■□□□ 1.13
PSEN1-207ENST00000553599 RMDN3Q96TC7 470 aa22.12■■□□□ 1.13
PSEN1-207ENST00000553599 BIN2Q9UBW5 565 aaPredicted RBP22.12■■□□□ 1.13
PSEN1-207ENST00000553599 FRMPD4Q14CM0 1322 aa22.11■■□□□ 1.13
PSEN1-207ENST00000553599 COBLO75128 1261 aa22.11■■□□□ 1.13
PSEN1-207ENST00000553599 U2AF2P26368 475 aaKnown RBP eCLIP22.11■■□□□ 1.13
PSEN1-207ENST00000553599 IRF5Q13568 498 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms