RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TFAP4Q01664 338 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 STK4Q13043 487 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 CRNKL1Q9BZJ0 848 aaKnown RBP12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 NIP7Q9Y221 180 aaKnown RBP eCLIP12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 A0A1W2PQC6 194 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 FGFR1OPO95684 399 aaKnown RBP12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 CYP2D6P10635 497 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 DNAJC7Q99615 494 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 KANSL2Q9H9L4 492 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 LRRC53A6NM62 1247 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 AGPSO00116 658 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 SRGNP10124 158 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 E2F5Q15329 346 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 CHRNDQ07001 517 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 DZIP1Q86YF9 867 aaKnown RBP12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 IRF2BP1Q8IU81 584 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 KCNK3O14649 394 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TCERG1LQ5VWI1 586 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 ALS2CLQ60I27 953 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 CNNM4Q6P4Q7 775 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 SV2BQ7L1I2 683 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 KAT2BQ92831 832 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 DHTKD1Q96HY7 919 aaPredicted RBP12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 SPAG5Q96R06 1193 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 NDST4Q9H3R1 872 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TRAPPC10P48553 1259 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 SEPT11Q9NVA2 429 aaKnown RBP12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 MRC1P22897 1456 aa12.82□□□□□ -0.36
PPFIA2-227ENST00000552948 TNNC1P63316 161 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 TRIM28Q13263 835 aaKnown RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 CCDC172P0C7W6 258 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 CTNNA1P35221 906 aaKnown RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 POLR2FP61218 127 aaKnown RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 TROAPQ12815 778 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 SPTY2D1Q68D10 685 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 CCDC84Q86UT8 332 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 ARFGAP2Q8N6H7 521 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 PIGBQ92521 554 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 CD248Q9HCU0 757 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 SLC1A4P43007 532 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 CCDC155Q8N6L0 562 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 OR2W6PQ8NHA6 318 aa12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 BMP2KQ9NSY1 1161 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
PPFIA2-227ENST00000552948 MEFVO15553 781 aaPredicted RBP12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 SEC23AQ15436 765 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 IL17AQ16552 155 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 CREG2Q8IUH2 290 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 CXorf56Q9H5V9 222 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 WDR17Q8IZU2 1322 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 PALMO75781 387 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 DDAH1O94760 285 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 LSP1P33241 339 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 STAG2Q8N3U4 1231 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 TBC1D5Q92609 795 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 PLAAQ9Y263 795 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 KDM3BQ7LBC6 1761 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 FAM153BP0C7A2 387 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 GBP2P32456 591 aaPredicted RBP12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 KLHL30Q0D2K2 578 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 FAM153CQ494X1 144 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 SELENOSQ9BQE4 189 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 ADAMTS1Q9UHI8 967 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 PCDHA4Q9UN74 947 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
PPFIA2-227ENST00000552948 EVX2Q03828 476 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 KRT71Q3SY84 523 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 TTMPQ5BVD1 217 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 SFMBT2Q5VUG0 894 aa12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 ADAT2Q7Z6V5 191 aaKnown RBP12.79□□□□□ -0.36
PPFIA2-227ENST00000552948 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms