RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, human

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCC2-215	ENST00000552931	KIFC2	Q96AC6	838 aa		7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TRERF1	Q96PN7	1200 aa		7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	KRT23	Q9C075	422 aa		7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	RAVER2	Q9HCJ3	691 aa	Known RBP	7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	VTA1	Q9NP79	307 aa		7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	XPNPEP3	Q9NQH7	507 aa		7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ADD3	Q9UEY8	706 aa	Known RBP	7.12	□□□□□ -1.27
SMARCC2-215	ENST00000552931	LAMA4	Q16363	1823 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ASTN1	O14525	1302 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931		A0A1W2PQ45	241 aa	Predicted RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931		A0A1W2PQY0	241 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SOWAHB	A6NEL2	793 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TRIM6-TRIM34	B2RNG4	842 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	NMT2	O60551	498 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CD4	P01730	458 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	GSPT1	P15170	499 aa	Known RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TAL1	P17542	331 aa	Predicted RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CNGA1	P29973	690 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ACLY	P53396	1101 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TRAF1	Q13077	416 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SEC23A	Q15436	765 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	IMMT	Q16891	758 aa	Known RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CCDC144B	Q3MJ40	725 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	DUSP28	Q4G0W2	176 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PRAMEF19	Q5SWL8	479 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	GJC2	Q5T442	439 aa	Predicted RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SYDE2	Q5VT97	1194 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TBC1D10C	Q8IV04	446 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CCDC144CP	Q8IYA2	1237 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	C7orf61	Q8IZ16	206 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	FAM177A1	Q8N128	213 aa	Predicted RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CLEC4D	Q8WXI8	215 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	MAP4K1	Q92918	833 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	AGBL1	Q96MI9	1066 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	IWS1	Q96ST2	819 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SPC25	Q9HBM1	224 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	INCENP	Q9NQS7	918 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PDLIM7	Q9NR12	457 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	RNF146	Q9NTX7	359 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	POLR3E	Q9NVU0	708 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ZSWIM5	Q9P217	1185 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CDH23	Q9H251	3354 aa		7.11	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SYNRG	Q9UMZ2	1314 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931		B4DLN1	442 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ARVCF	O00192	962 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SGSM2	O43147	1006 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	KPNA6	O60684	536 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CHML	P26374	656 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ADCYAP1R1	P41586	468 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	MRPL12	P52815	198 aa	Known RBP	7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SMAD3	P84022	425 aa	Known RBP	7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	FAAP100	Q0VG06	881 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	KCNA10	Q16322	511 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	RASIP1	Q5U651	963 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CWC27	Q6UX04	472 aa	Known RBP	7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	KCTD1	Q719H9	257 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CPXCR1	Q8N123	301 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ENAH	Q8N8S7	591 aa	Predicted RBP	7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PNMA1	Q8ND90	353 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	RILPL2	Q969X0	211 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	GLT1D1	Q96MS3	346 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	DIAPH3	Q9NSV4	1193 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TBX21	Q9UL17	535 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CUL9	Q8IWT3	2517 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	LTBP2	Q14767	1821 aa		7.1	□□□□□ -1.27
SMARCC2-215	ENST00000552931	NEDD4	P46934	1319 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931		A0A0U1RQG5	324 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TRIM43B	A6NCK2	446 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PALM3	A6NDB9	673 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ADCY6	O43306	1168 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ZEB2	O60315	1214 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PGK1	P00558	417 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TIMP1	P01033	207 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ASGR1	P07306	291 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CLTB	P09497	229 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	HOXD8	P13378	290 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	COL9A1	P20849	921 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	ALDH5A1	P51649	535 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	CNTN2	Q02246	1040 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TLE2	Q04725	743 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PTPN11	Q06124	597 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TROAP	Q12815	778 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TSGA10IP	Q3SY00	556 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	MUM1L1	Q5H9M0	696 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TTBK2	Q6IQ55	1244 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	STOX1	Q6ZVD7	989 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	MCF2L2	Q86YR7	1114 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	FAM126B	Q8IXS8	530 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TMTC2	Q8N394	836 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	GLMN	Q92990	594 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	EMID1	Q96A84	441 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	PBXIP1	Q96AQ6	731 aa		7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	MPHOSPH6	Q99547	160 aa	Known RBP	7.09	□□□□□ -1.27
SMARCC2-215	ENST00000552931	LBHD1	Q9BQE6	289 aa	Predicted RBP	7.09	□□□□□ -1.27

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