RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 KIAA0100Q14667 2235 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 PLXNB2O15031 1838 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 NKRFO15226 690 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 COBLO75128 1261 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 ECM2O94769 699 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 SGPL1O95470 568 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 CFBP00751 764 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 TFRCP02786 760 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 PGK2P07205 417 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 RARBP10826 455 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 AKR1A1P14550 325 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 CNGA1P29973 690 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 HSD17B4P51659 736 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 RPS6P62753 249 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 PDE4DQ08499 809 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 STXBP2Q15833 593 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 IQSEC1Q6DN90 963 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 PSTPIP2Q9H939 334 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 BRPF3Q9ULD4 1205 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 LIMCH1Q9UPQ0 1083 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 Q9Y3F1 56 aa11.82□□□□□ -0.52
TRAFD1-208ENST00000552890 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 SPDYE3A6NKU9 549 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 NFIBO00712 420 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 CYTH3O43739 400 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 ZEB2O60315 1214 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 PEX10O60683 326 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 DEXIO95424 95 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 TGFB3P10600 412 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 SCG2P13521 617 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 CALML3P27482 149 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 ACVR2BQ13705 512 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 GNPTABQ3T906 1256 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 HEATR3Q7Z4Q2 680 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 CCDC144CPQ8IYA2 1237 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 NPLOC4Q8TAT6 608 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 MORC4Q8TE76 937 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 CLEC4DQ8WXI8 215 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 RMDN3Q96TC7 470 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 SENP2Q9HC62 589 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 BARHL2Q9NY43 387 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 V9GY48 417 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 MYH6P13533 1939 aa11.81□□□□□ -0.52
TRAFD1-208ENST00000552890 ZNFX1Q9P2E3 1918 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 MAFGO15525 162 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 PFKFB2O60825 505 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 IGHA2P01877 340 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 CYBAP13498 195 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 NAPAP54920 295 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 SNAP25P60880 206 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 PFKFB3Q16875 520 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 MUM1L1Q5H9M0 696 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 ARMCX2Q7L311 632 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 RNF180Q86T96 592 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 PCSK9Q8NBP7 692 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 U2AF1L4Q8WU68 220 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 SCFD2Q8WU76 684 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 HTATIP2Q9BUP3 242 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 BACH2Q9BYV9 841 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 STK36Q9NRP7 1315 aa11.8□□□□□ -0.52
TRAFD1-208ENST00000552890 KBTBD13C9JR72 458 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CPA1P15085 419 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 RXRAP19793 462 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CCND2P30279 289 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CYP2C19P33261 490 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 ADD1P35611 737 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 RGS19P49795 217 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 ADCY7P51828 1080 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 HMGN5P82970 282 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CAP1Q01518 475 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 TTLL4Q14679 1199 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CCL14Q16627 93 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 RASGRP2Q7LDG7 609 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 CCDC82Q8N4S0 544 aa11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 GIMAP8Q8ND71 665 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 SYTL5Q8TDW5 730 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-208ENST00000552890 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms