RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 VAV2P52735 878 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 ZBED6P86452 979 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 TTI2Q6NXR4 508 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 HEATR3Q7Z4Q2 680 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 CPVLQ9H3G5 476 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 SLC39A2Q9NP94 309 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 SNX12Q9UMY4 172 aa8.69□□□□□ -1.02
SYT1-212ENST00000552744 LOC102724159A0A0B4J2E5 919 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 EPHB6O15197 1021 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 HSF2BPO75031 334 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 CALM1P0DP23 149 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 CALM2P0DP24 149 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 CALM3P0DP25 149 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 INPP5BP32019 993 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 LONP1P36776 959 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 GUCY2FP51841 1108 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 RCAN1P53805 252 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 RRAGAQ7L523 313 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 TRIM58Q8NG06 486 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 LRRC15Q8TF66 581 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 AENQ8WTP8 325 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 OSBPL9Q96SU4 736 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 DUSP9Q99956 384 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 PYM1Q9BRP8 204 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 TANGO6Q9C0B7 1094 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 THAP9Q9H5L6 903 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 PCDHA13Q9Y5I0 950 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 KLRC4O43908 158 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 PLCG1P19174 1290 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 GUCY2CP25092 1073 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 PAFAH1B1P43034 410 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 KIF11P52732 1056 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 RASSF7Q02833 373 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 MEA1Q16626 185 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 PTPROQ16827 1216 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 PFKFB3Q16875 520 aaPredicted RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 TDRD12Q587J7 1177 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 C8orf74Q6P047 294 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 MMS22LQ6ZRQ5 1243 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 AMOTL1Q8IY63 956 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 CCDC155Q8N6L0 562 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 P2RX5Q93086 422 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 RIOK1Q9BRS2 568 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 SLC24A3Q9HC58 644 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 RBM12Q9NTZ6 932 aaKnown RBP8.68□□□□□ -1.02
SYT1-212ENST00000552744 ARHGAP20Q9P2F6 1191 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 NFU1Q9UMS0 254 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 CAPN7Q9Y6W3 813 aa8.68□□□□□ -1.02
SYT1-212ENST00000552744 ANO9A1A5B4 782 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 EIF3HO15372 352 aaKnown RBP eCLIP8.67□□□□□ -1.02
SYT1-212ENST00000552744 GOLGA8HP0CJ92 632 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 GUCY1A3Q02108 690 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 APBA1Q02410 837 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 ARID5AQ03989 594 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 GFPT1Q06210 699 aaPredicted RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 TTMPQ5BVD1 217 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 DYMQ7RTS9 669 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 GIMAP8Q8ND71 665 aaPredicted RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 MTA3Q9BTC8 594 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 NLRC4Q9NPP4 1024 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 SALL4Q9UJQ4 1053 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 OPA1O60313 960 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 TECP42680 631 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 MAGEA1P43355 309 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 TRAPPC10P48553 1259 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 CARSP49589 748 aaKnown RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 NNTQ13423 1086 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 TXNRD1Q16881 649 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 RNF187Q5TA31 235 aaPredicted RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 C4orf32Q8N8J7 132 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 CCDC43Q96MW1 224 aaKnown RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 ZIM3Q96PE6 472 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 ALS2CR12Q96Q35 445 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 NUP58Q9BVL2 599 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 TTYH3Q9C0H2 523 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 TCP11L1Q9NUJ3 509 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 STIM2Q9P246 746 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 PACSIN2Q9UNF0 486 aaPredicted RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 COL18A1P39060 1754 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 GRIN2DO15399 1336 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 LRRC53A6NM62 1247 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 MYO1FO00160 1098 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 SHOX2O60902 331 aaPredicted RBP8.67□□□□□ -1.02
SYT1-212ENST00000552744 DDAH1O94760 285 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 KIAA0754O94854 1291 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 RHOBTB3O94955 611 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 FAM153BP0C7A2 387 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 CCNE1P24864 410 aa8.67□□□□□ -1.02
SYT1-212ENST00000552744 HNRNPH1P31943 449 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms