RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 GZF1Q9H116 711 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-234ENST00000552645 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-234ENST00000552645 TPCN1Q9ULQ1 816 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-234ENST00000552645 CCDC85CA6NKD9 419 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 CFBP00751 764 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 INHAP05111 366 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
LETMD1-234ENST00000552645 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
LETMD1-234ENST00000552645 SMARCA1P28370 1054 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 RCAN1P53805 252 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 TRIM32Q13049 653 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 BAATQ14032 418 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-234ENST00000552645 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 RNF207Q6ZRF8 634 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 CLEC4DQ8WXI8 215 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
LETMD1-234ENST00000552645 PHKBQ93100 1093 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 IL17RAQ96F46 866 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 ZNF274Q96GC6 653 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-234ENST00000552645 GBP4Q96PP9 640 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 FLRT1Q9NZU1 646 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 MRPL11Q9Y3B7 192 aaKnown RBP11.46□□□□□ -0.57
LETMD1-234ENST00000552645 PFASO15067 1338 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
LETMD1-234ENST00000552645 LCTP09848 1927 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 DYNC1I1O14576 645 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 ZNF500O60304 480 aaPredicted RBP11.46□□□□□ -0.58
LETMD1-234ENST00000552645 DTNBO60941 627 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 HMGCRP04035 888 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 MSNP26038 577 aaKnown RBP11.46□□□□□ -0.58
LETMD1-234ENST00000552645 CYP2C19P33261 490 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 EVCP57679 992 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 UBXN2AP68543 259 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 AKAP17AQ02040 695 aaKnown RBP11.46□□□□□ -0.58
LETMD1-234ENST00000552645 PPP2R5BQ15173 497 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 RABEP1Q15276 862 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 NECAB1Q8N987 351 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 PXYLP1Q8TE99 480 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 MAML3Q96JK9 1138 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 PURBQ96QR8 312 aaKnown RBP11.46□□□□□ -0.58
LETMD1-234ENST00000552645 SLC26A6Q9BXS9 759 aa11.46□□□□□ -0.58
LETMD1-234ENST00000552645 ALDH8A1Q9H2A2 487 aaPredicted RBP11.46□□□□□ -0.58
LETMD1-234ENST00000552645 CAPN15O75808 1086 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 LARGE1O95461 756 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 HOXC6P09630 235 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
LETMD1-234ENST00000552645 RPS6P62753 249 aaKnown RBP11.45□□□□□ -0.58
LETMD1-234ENST00000552645 TRAF1Q13077 416 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 MFSD14CQ5VZR4 134 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
LETMD1-234ENST00000552645 MCF2L2Q86YR7 1114 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 TRMT44Q8IYL2 757 aaKnown RBP11.45□□□□□ -0.58
LETMD1-234ENST00000552645 TBC1D5Q92609 795 aa11.45□□□□□ -0.58
LETMD1-234ENST00000552645 KIAA0100Q14667 2235 aaKnown RBP11.45□□□□□ -0.58
LETMD1-234ENST00000552645 DNAJC25-GNG10A0A024R161 153 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 ST18O60284 1047 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 CNGA1P29973 690 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 HOXA13P31271 388 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-234ENST00000552645 FUT2Q10981 343 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 SCRN1Q12765 414 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 MTFR1Q15390 333 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 ME3Q16798 604 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 ZNF792Q3KQV3 632 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 ANP32BQ92688 251 aaKnown RBP11.44□□□□□ -0.58
LETMD1-234ENST00000552645 SNX21Q969T3 373 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 ZNF333Q96JL9 665 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 RNF208Q9H0X6 261 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 LIMCH1Q9UPQ0 1083 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 DDX49Q9Y6V7 483 aaKnown RBP11.44□□□□□ -0.58
LETMD1-234ENST00000552645 NID2Q14112 1375 aa11.44□□□□□ -0.58
LETMD1-234ENST00000552645 BRCA2P51587 3418 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 PFKFB2O60825 505 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 CCL5P13501 91 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 NAPAP54920 295 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 CACNB2Q08289 660 aaPredicted RBP11.43□□□□□ -0.58
LETMD1-234ENST00000552645 DMTNQ08495 405 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 SSRP1Q08945 709 aaKnown RBP11.43□□□□□ -0.58
LETMD1-234ENST00000552645 CSPP1Q1MSJ5 1256 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 FCHSD1Q86WN1 690 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 HSCBQ8IWL3 235 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 FAM133AQ8N9E0 248 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
LETMD1-234ENST00000552645 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 GCOM1H8Y6P7 765 aaPredicted RBP11.42□□□□□ -0.58
LETMD1-234ENST00000552645 OPLAHO14841 1288 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 POLR2MP0CAP2 368 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 SCG2P13521 617 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 IFNAR1P17181 557 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 NTRK3Q16288 839 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 OLFML2BQ68BL8 750 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
LETMD1-234ENST00000552645 TINF2Q9BSI4 451 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
LETMD1-234ENST00000552645 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms