RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 CCPG1Q9ULG6 757 aa20.04■□□□□ 0.8
CACNB3-222ENST00000552465 MTCH2Q9Y6C9 303 aa20.04■□□□□ 0.8
CACNB3-222ENST00000552465 TNKSO95271 1327 aa20.03■□□□□ 0.8
CACNB3-222ENST00000552465 CA3P07451 260 aa20.03■□□□□ 0.8
CACNB3-222ENST00000552465 PURAQ00577 322 aaKnown RBP20.03■□□□□ 0.8
CACNB3-222ENST00000552465 LRRFIP1Q32MZ4 808 aaKnown RBP20.03■□□□□ 0.8
CACNB3-222ENST00000552465 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
CACNB3-222ENST00000552465 NAPBQ9H115 298 aa20.03■□□□□ 0.8
CACNB3-222ENST00000552465 IL17RBQ9NRM6 502 aa20.03■□□□□ 0.8
CACNB3-222ENST00000552465 STX8Q9UNK0 236 aa20.03■□□□□ 0.8
CACNB3-222ENST00000552465 GTPBP6O43824 516 aaPredicted RBP20.02■□□□□ 0.8
CACNB3-222ENST00000552465 ICAM1P05362 532 aa20.02■□□□□ 0.8
CACNB3-222ENST00000552465 MYL3P08590 195 aa20.02■□□□□ 0.8
CACNB3-222ENST00000552465 ACTN1P12814 892 aa20.02■□□□□ 0.8
CACNB3-222ENST00000552465 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.8
CACNB3-222ENST00000552465 CERS4Q9HA82 394 aa20.02■□□□□ 0.8
CACNB3-222ENST00000552465 ADD3Q9UEY8 706 aaKnown RBP20.02■□□□□ 0.8
CACNB3-222ENST00000552465 GBF1Q92538 1859 aa20.02■□□□□ 0.8
CACNB3-222ENST00000552465 RBM47A0AV96 593 aaKnown RBP20.01■□□□□ 0.79
CACNB3-222ENST00000552465 EPOPA6NHQ4 379 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 RFC2P35250 354 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 CPT1AP50416 773 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 RASGRP2Q7LDG7 609 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 PHOSPHO2Q8TCD6 241 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 MTG1Q9BT17 334 aaPredicted RBP20.01■□□□□ 0.79
CACNB3-222ENST00000552465 DCTPP1Q9H773 170 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 INCENPQ9NQS7 918 aa20.01■□□□□ 0.79
CACNB3-222ENST00000552465 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
CACNB3-222ENST00000552465 LRRC37A2A6NM11 1700 aa20■□□□□ 0.79
CACNB3-222ENST00000552465 LOC102724159A0A0B4J2E5 919 aa20■□□□□ 0.79
CACNB3-222ENST00000552465 TSPY2A6NKD2 308 aa20■□□□□ 0.79
CACNB3-222ENST00000552465 NMT2O60551 498 aa20■□□□□ 0.79
CACNB3-222ENST00000552465 ALDH5A1P51649 535 aaPredicted RBP20■□□□□ 0.79
CACNB3-222ENST00000552465 PWP2Q15269 919 aaKnown RBP20■□□□□ 0.79
CACNB3-222ENST00000552465 SLC9A7Q96T83 725 aa20■□□□□ 0.79
CACNB3-222ENST00000552465 RANBP17Q9H2T7 1088 aaKnown RBP20■□□□□ 0.79
CACNB3-222ENST00000552465 GPHNQ9NQX3 736 aaPredicted RBP20■□□□□ 0.79
CACNB3-222ENST00000552465 COG5Q9UP83 839 aa20■□□□□ 0.79
CACNB3-222ENST00000552465 IQCF3P0C7M6 154 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 TAP1Q03518 808 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 NBPF20Q3BBV1 942 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 ZMYM1Q5SVZ6 1142 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 KRT40Q6A162 431 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 OR6J1Q8NGC5 347 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 MTMR7Q9Y216 660 aa19.99■□□□□ 0.79
CACNB3-222ENST00000552465 ARHGEF15O94989 841 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 NOVP48745 357 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 CTDSPL2Q05D32 466 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 CCDC96Q2M329 555 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 FAM47CQ5HY64 1035 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 TTBK2Q6IQ55 1244 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 NFRKBQ6P4R8 1299 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 BTNL9Q6UXG8 535 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 HERC6Q8IVU3 1022 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 MIER1Q8N108 512 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 RETREG2Q8NC44 543 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 DCAF4Q8WV16 495 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 ARNTL2Q8WYA1 636 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 EPHX3Q9H6B9 360 aa19.98■□□□□ 0.79
CACNB3-222ENST00000552465 NCOR1O75376 2440 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 TCF20Q9UGU0 1960 aaKnown RBP19.97■□□□□ 0.79
CACNB3-222ENST00000552465 KIF28PB7ZC32 967 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 PITPNM1O00562 1244 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 NFIBO00712 420 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 TLL1O43897 1013 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 SLC16A2P36021 539 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 BRDTQ58F21 947 aaPredicted RBP19.97■□□□□ 0.79
CACNB3-222ENST00000552465 PPP1R13LQ8WUF5 828 aa19.97■□□□□ 0.79
CACNB3-222ENST00000552465 FTOQ9C0B1 505 aaKnown RBP eCLIP19.97■□□□□ 0.79
CACNB3-222ENST00000552465 PTPDC1A2A3K4 754 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
CACNB3-222ENST00000552465 FOXP2O15409 715 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 KPNA6O60684 536 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 PTPN11Q06124 597 aaPredicted RBP19.96■□□□□ 0.79
CACNB3-222ENST00000552465 SYDE2Q5VT97 1194 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 HLA-CQ95604 372 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 LRFN3Q9BTN0 628 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 FSD1Q9BTV5 496 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 ARIH1Q9Y4X5 557 aaPredicted RBP19.96■□□□□ 0.79
CACNB3-222ENST00000552465 TTC41PQ6P2S7 1318 aa19.96■□□□□ 0.79
CACNB3-222ENST00000552465 CHD7Q9P2D1 2997 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 A6NJR5 290 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 RANBP6O60518 1105 aaKnown RBP19.95■□□□□ 0.78
CACNB3-222ENST00000552465 CALML3P27482 149 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 GRB10Q13322 594 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 BFSP2Q13515 415 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 PI4K2BQ8TCG2 481 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 CLEC4DQ8WXI8 215 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 RCAN3Q9UKA8 241 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 RAD50Q92878 1312 aa19.95■□□□□ 0.78
CACNB3-222ENST00000552465 PRRC2BQ5JSZ5 2229 aaKnown RBP19.94■□□□□ 0.78
CACNB3-222ENST00000552465 BAIAP3O94812 1187 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 HOXD11P31277 338 aaPredicted RBP19.94■□□□□ 0.78
CACNB3-222ENST00000552465 PDE4DQ08499 809 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 PPP2R5BQ15173 497 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 SLC30A10Q6XR72 485 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 RNF207Q6ZRF8 634 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 SCFD2Q8WU76 684 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 COPS5Q92905 334 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms