RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 SUGP1Q8IWZ8 645 aaKnown RBP12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 AP5M1Q9H0R1 490 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 NBNO60934 754 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 EEPD1Q7L9B9 569 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 RPAINQ86UA6 219 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 FBXO16Q8IX29 292 aaPredicted RBP12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 ANKRD35Q8N283 1001 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
SLC48A1-209ENST00000552003 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 ZEB2O60315 1214 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 PDGFBP01127 241 aaPredicted RBP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 GTF2F1P35269 517 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 PKN1Q16512 942 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 EPC2Q52LR7 807 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 DHX38Q92620 1227 aaKnown RBP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 CNTNAP3BQ96NU0 1288 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 PURBQ96QR8 312 aaKnown RBP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 CNTNAP3Q9BZ76 1288 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 TLR7Q9NYK1 1049 aaKnown RBP12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 Q9Y3F1 56 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 PKD1L2Q7Z442 2459 aa12.38□□□□□ -0.43
SLC48A1-209ENST00000552003 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 STXBP3O00186 592 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 TBX10O75333 385 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 CXCL10P02778 98 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 NBL1P41271 181 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 TIGD5Q53EQ6 642 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 SH2D4AQ9H788 454 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 NLRC5Q86WI3 1866 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 FRYLO94915 3013 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 USP24Q9UPU5 2620 aa12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 GREB1LQ9C091 1923 aaPredicted RBP12.37□□□□□ -0.43
SLC48A1-209ENST00000552003 LOC730098B7Z3J9 87 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 H3BNC9 293 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 LINC01565O15544 149 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 IGSF3O75054 1194 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 MYL3P08590 195 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 HTRA4P83105 476 aaPredicted RBP12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 HYAL1Q12794 435 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 TRAF7Q6Q0C0 670 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 RMDN1Q96DB5 314 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 NSUN3Q9H649 340 aaKnown RBP12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 A1CFQ9NQ94 594 aaKnown RBP12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
SLC48A1-209ENST00000552003 RAD21O60216 631 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 CDK8P49336 464 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 GPM6BQ13491 265 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 MBTPS1Q14703 1052 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 CCDC158Q5M9N0 1113 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 MIER1Q8N108 512 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 ADSSL1Q8N142 457 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 POP1Q99575 1024 aaKnown RBP12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 SWAP70Q9UH65 585 aa12.35□□□□□ -0.43
SLC48A1-209ENST00000552003 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 PRKAB2O43741 272 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 LGR5O75473 907 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 NDUFB10O96000 172 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 ARP10275 920 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 SMAD4Q13485 552 aaKnown RBP12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 BFSP2Q13515 415 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 CBX2Q14781 532 aaPredicted RBP12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 PTPROQ16827 1216 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 DUSP28Q4G0W2 176 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 NFRKBQ6P4R8 1299 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 KIAA1211Q6ZU35 1233 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 FRMD5Q7Z6J6 570 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 PRPF38AQ8NAV1 312 aaKnown RBP12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 MTG1Q9BT17 334 aaPredicted RBP12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms