RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 AAK1Q2M2I8 961 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 ZMYM1Q5SVZ6 1142 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 DCAF4Q8WV16 495 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 SCLYQ96I15 445 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 TNKSO95271 1327 aa16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 ACTN1P12814 892 aa16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 MTMR7Q9Y216 660 aa16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHMP1A-210ENST00000551981 RAD50Q92878 1312 aa16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 MYL3P08590 195 aa16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 RFC2P35250 354 aa16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 ALDH5A1P51649 535 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 CTDSPL2Q05D32 466 aa16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 TMEM67Q5HYA8 995 aa16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 MTG1Q9BT17 334 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 TRMT13Q9NUP7 481 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-210ENST00000551981 PTPDC1A2A3K4 754 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 GTPBP6O43824 516 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 NMT2O60551 498 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 CYP2C9P11712 490 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 MYOGP15173 224 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 PURAQ00577 322 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 BAATQ14032 418 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 SKIV2LQ15477 1246 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 DEFB128Q7Z7B8 93 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 OR6J1Q8NGC5 347 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 PI4K2BQ8TCG2 481 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 PURBQ96QR8 312 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 PNMA2Q9UL42 364 aa16.75■□□□□ 0.27
CHMP1A-210ENST00000551981 SCN5AQ14524 2016 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 FAM47CQ5HY64 1035 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 SYDE2Q5VT97 1194 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 SLC9A7Q96T83 725 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 TCF20Q9UGU0 1960 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-210ENST00000551981 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 SCN10AQ9Y5Y9 1956 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 NFIBO00712 420 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 ORC4O43929 436 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 KPNA6O60684 536 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 CA3P07451 260 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 NOVP48745 357 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 PDE4DQ08499 809 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 RETREG2Q8NC44 543 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 VWCEQ96DN2 955 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 C1QTNF1Q9BXJ1 281 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 INCENPQ9NQS7 918 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
CHMP1A-210ENST00000551981 PRRC2BQ5JSZ5 2229 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 B4DLN1 442 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 PITPNM1O00562 1244 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 TOP1P11387 765 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 BMP1P13497 986 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 POU3F3P20264 500 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 MX1P20591 662 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 CALML3P27482 149 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 SLC16A2P36021 539 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 MRPL12P52815 198 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 PTPN11Q06124 597 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 NBPF20Q3BBV1 942 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 RNF207Q6ZRF8 634 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 PHOSPHO2Q8TCD6 241 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 NOD1Q9Y239 953 aa16.72■□□□□ 0.27
CHMP1A-210ENST00000551981 TFF2Q03403 129 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 BFSP2Q13515 415 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 SLC30A10Q6XR72 485 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 RAPGEFL1Q9UHV5 662 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 COG5Q9UP83 839 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 MTCH2Q9Y6C9 303 aa16.71■□□□□ 0.27
CHMP1A-210ENST00000551981 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 A6NJR5 290 aa16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 FOXP2O15409 715 aa16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 RRP12Q5JTH9 1297 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
CHMP1A-210ENST00000551981 DNERQ8NFT8 737 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms