RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-225ENST00000551845 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 PIBF1Q8WXW3 757 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 DEFB118Q96PH6 123 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 TINF2Q9BSI4 451 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
PTCH1-225ENST00000551845 ASB14A6NK59 587 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 B4DLN1 442 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 NFIBO00712 420 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 PLEKHA8P1O95397 391 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 CNGA1P29973 690 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 GPR153Q6NV75 609 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 TMTC3Q6ZXV5 915 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 C7orf61Q8IZ16 206 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 FAM133AQ8N9E0 248 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 C22orf23Q9BZE7 217 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 ADD3Q9UEY8 706 aaKnown RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 ZMYND8Q9ULU4 1186 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-225ENST00000551845 CNPY2Q9Y2B0 182 aa12.29□□□□□ -0.44
PTCH1-225ENST00000551845 IGHA2P01877 340 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 TAL1P17542 331 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 CALML3P27482 149 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 BMP8BP34820 402 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 ADD1P35611 737 aaKnown RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 NEK4P51957 841 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 RPS6P62753 249 aaKnown RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 CNTN2Q02246 1040 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 TOB2Q14106 344 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 SLC35G1Q2M3R5 365 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 PRAMEF19Q5SWL8 479 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 MAMDC4Q6UXC1 1216 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 NECAB2Q7Z6G3 386 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 GDF15Q99988 308 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
PTCH1-225ENST00000551845 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-225ENST00000551845 MYH4Q9Y623 1939 aa12.27□□□□□ -0.44
PTCH1-225ENST00000551845 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 MSCO60682 206 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 CFBP00751 764 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 CDC27P30260 824 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 CCT2P78371 535 aaKnown RBP12.27□□□□□ -0.45
PTCH1-225ENST00000551845 TBC1D5Q92609 795 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 PAK6Q9NQU5 681 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-225ENST00000551845 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-225ENST00000551845 LAMA4Q16363 1823 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 ALPK3Q96L96 1907 aa12.27□□□□□ -0.45
PTCH1-225ENST00000551845 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 GCOM1H8Y6P7 765 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 PPP1R11O60927 126 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 SYN1P17600 705 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 CCND3P30281 292 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 DNERQ8NFT8 737 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-225ENST00000551845 RLFQ13129 1914 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
PTCH1-225ENST00000551845 hCG_1642624A0A1W2PR95 340 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 CPLX1O14810 134 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 SEPT4O43236 478 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 CYBAP13498 195 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 RBM25P49756 843 aaKnown RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 AK2P54819 239 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 LRIT3Q3SXY7 679 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 TDHQ8IZJ6 230 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 SYTL5Q8TDW5 730 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 NSUN6Q8TEA1 469 aaKnown RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 DIS3LQ8TF46 1054 aaKnown RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 CUL5Q93034 780 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 PURBQ96QR8 312 aaKnown RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 TAAR1Q96RJ0 339 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 SLKQ9H2G2 1235 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 DDX20Q9UHI6 824 aaKnown RBP12.25□□□□□ -0.45
PTCH1-225ENST00000551845 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
PTCH1-225ENST00000551845 COL6A3P12111 3177 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 ZNF865P0CJ78 1059 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-225ENST00000551845 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms