RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 STK3Q13188 491 aa15.89■□□□□ 0.13
TROAP-213ENST00000550709 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
TROAP-213ENST00000550709 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
TROAP-213ENST00000550709 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
TROAP-213ENST00000550709 RGS22Q8NE09 1264 aa15.89■□□□□ 0.13
TROAP-213ENST00000550709 SYTL5Q8TDW5 730 aaPredicted RBP15.89■□□□□ 0.13
TROAP-213ENST00000550709 NCOA5Q9HCD5 579 aaKnown RBP15.89■□□□□ 0.13
TROAP-213ENST00000550709 V9GY48 417 aaPredicted RBP15.89■□□□□ 0.13
TROAP-213ENST00000550709 SYNGAP1Q96PV0 1343 aa15.89■□□□□ 0.13
TROAP-213ENST00000550709 CCDC196A0A1B0GTZ2 297 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 ASB14A6NK59 587 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 OPLAHO14841 1288 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 HOXA13P31271 388 aaPredicted RBP15.88■□□□□ 0.13
TROAP-213ENST00000550709 NEK4P51957 841 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 RCAN1P53805 252 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 FUT2Q10981 343 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 EEPD1Q7L9B9 569 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 C22orf23Q9BZE7 217 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 COL20A1Q9P218 1284 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 ADD3Q9UEY8 706 aaKnown RBP15.88■□□□□ 0.13
TROAP-213ENST00000550709 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
TROAP-213ENST00000550709 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
TROAP-213ENST00000550709 SEPT4O43236 478 aa15.87■□□□□ 0.13
TROAP-213ENST00000550709 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
TROAP-213ENST00000550709 ZNF865P0CJ78 1059 aaPredicted RBP15.87■□□□□ 0.13
TROAP-213ENST00000550709 ALDH5A1P51649 535 aaPredicted RBP15.87■□□□□ 0.13
TROAP-213ENST00000550709 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
TROAP-213ENST00000550709 LHX8Q68G74 356 aa15.87■□□□□ 0.13
TROAP-213ENST00000550709 GPKOWQ92917 476 aaPredicted RBP eCLIP15.87■□□□□ 0.13
TROAP-213ENST00000550709 LENG1Q96BZ8 264 aaPredicted RBP15.87■□□□□ 0.13
TROAP-213ENST00000550709 TAAR1Q96RJ0 339 aa15.87■□□□□ 0.13
TROAP-213ENST00000550709 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
TROAP-213ENST00000550709 NRBP1Q9UHY1 535 aa15.87■□□□□ 0.13
TROAP-213ENST00000550709 GCOM1H8Y6P7 765 aaPredicted RBP15.86■□□□□ 0.13
TROAP-213ENST00000550709 POLR2MP0CAP2 368 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 AK2P54819 239 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 EVCP57679 992 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 PDE4DQ08499 809 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 PPP2R5BQ15173 497 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 FCHSD1Q86WN1 690 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
TROAP-213ENST00000550709 PHKBQ93100 1093 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 IL17RAQ96F46 866 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 ZNF274Q96GC6 653 aaPredicted RBP15.86■□□□□ 0.13
TROAP-213ENST00000550709 RMDN3Q96TC7 470 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 ABHD16BQ9H3Z7 469 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 UPF2Q9HAU5 1272 aaKnown RBP15.86■□□□□ 0.13
TROAP-213ENST00000550709 TPCN1Q9ULQ1 816 aa15.86■□□□□ 0.13
TROAP-213ENST00000550709 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
TROAP-213ENST00000550709 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 MSCO60682 206 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 FARP2O94887 1054 aaPredicted RBP15.85■□□□□ 0.13
TROAP-213ENST00000550709 EIF2AK2P19525 551 aaKnown RBP15.85■□□□□ 0.13
TROAP-213ENST00000550709 RGS19P49795 217 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 HSD17B4P51659 736 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 CCDC144BQ3MJ40 725 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 ARHGEF16Q5VV41 709 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 DNERQ8NFT8 737 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 NSUN6Q8TEA1 469 aaKnown RBP15.85■□□□□ 0.13
TROAP-213ENST00000550709 DIS3LQ8TF46 1054 aaKnown RBP15.85■□□□□ 0.13
TROAP-213ENST00000550709 PDGFCQ9NRA1 345 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 OGDHLQ9ULD0 1010 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 FAM184BQ9ULE4 1060 aa15.85■□□□□ 0.13
TROAP-213ENST00000550709 MKI67P46013 3256 aaKnown RBP15.84■□□□□ 0.13
TROAP-213ENST00000550709 CPLX1O14810 134 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 RARBP10826 455 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 AKR1A1P14550 325 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 AKAP17AQ02040 695 aaKnown RBP15.84■□□□□ 0.13
TROAP-213ENST00000550709 MLLT1Q03111 559 aaPredicted RBP15.84■□□□□ 0.13
TROAP-213ENST00000550709 ANKRD1Q15327 319 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 USP17L6PQ6QN14 398 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 CUL5Q93034 780 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 SLC26A6Q9BXS9 759 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 KATNBL1Q9H079 304 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 ALDH8A1Q9H2A2 487 aaPredicted RBP15.84■□□□□ 0.13
TROAP-213ENST00000550709 SLKQ9H2G2 1235 aaPredicted RBP15.84■□□□□ 0.13
TROAP-213ENST00000550709 PSTPIP2Q9H939 334 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 SMCHD1A6NHR9 2005 aa15.84■□□□□ 0.13
TROAP-213ENST00000550709 PGK1P00558 417 aa15.83■□□□□ 0.12
TROAP-213ENST00000550709 ADCYAP1R1P41586 468 aa15.83■□□□□ 0.12
TROAP-213ENST00000550709 NAPAP54920 295 aa15.83■□□□□ 0.12
TROAP-213ENST00000550709 GJC2Q5T442 439 aaPredicted RBP15.83■□□□□ 0.12
TROAP-213ENST00000550709 SMARCC2Q8TAQ2 1214 aa15.83■□□□□ 0.12
TROAP-213ENST00000550709 MORC4Q8TE76 937 aa15.83■□□□□ 0.12
TROAP-213ENST00000550709 PAWRQ96IZ0 340 aaKnown RBP15.83■□□□□ 0.12
TROAP-213ENST00000550709 MPHOSPH6Q99547 160 aaKnown RBP15.83■□□□□ 0.12
TROAP-213ENST00000550709 MAF1Q9H063 256 aa15.83■□□□□ 0.12
TROAP-213ENST00000550709 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.82■□□□□ 0.12
TROAP-213ENST00000550709 B4DLN1 442 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 STXBP3O00186 592 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 DTNBO60941 627 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 MYCLP12524 364 aaPredicted RBP15.82■□□□□ 0.12
TROAP-213ENST00000550709 PTGS1P23219 599 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 EDNRBP24530 442 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 MRPL12P52815 198 aaKnown RBP15.82■□□□□ 0.12
TROAP-213ENST00000550709 NTRK3Q16288 839 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 UBE2SQ16763 222 aa15.82■□□□□ 0.12
TROAP-213ENST00000550709 TYW1BQ6NUM6 668 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms