RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 TOMM22Q9NS69 142 aa20.28■□□□□ 0.84
HCFC2-205ENST00000550444 TRMT13Q9NUP7 481 aaKnown RBP20.28■□□□□ 0.84
HCFC2-205ENST00000550444 ADD3Q9UEY8 706 aaKnown RBP20.28■□□□□ 0.84
HCFC2-205ENST00000550444 ICAM1P05362 532 aa20.27■□□□□ 0.84
HCFC2-205ENST00000550444 ATP2A2P16615 1042 aaKnown RBP20.27■□□□□ 0.84
HCFC2-205ENST00000550444 DUSP28Q4G0W2 176 aa20.27■□□□□ 0.84
HCFC2-205ENST00000550444 DEFB128Q7Z7B8 93 aa20.27■□□□□ 0.84
HCFC2-205ENST00000550444 DCAF4Q8WV16 495 aa20.27■□□□□ 0.84
HCFC2-205ENST00000550444 UHRF1Q96T88 793 aaPredicted RBP20.27■□□□□ 0.84
HCFC2-205ENST00000550444 TSPYL2Q9H2G4 693 aaPredicted RBP20.27■□□□□ 0.84
HCFC2-205ENST00000550444 GPCPD1Q9NPB8 672 aa20.27■□□□□ 0.84
HCFC2-205ENST00000550444 GPHNQ9NQX3 736 aaPredicted RBP20.27■□□□□ 0.84
HCFC2-205ENST00000550444 TTC28Q96AY4 2481 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 FOXP2O15409 715 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 SUPT20HL2P0C7V6 817 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 ALDH5A1P51649 535 aaPredicted RBP20.26■□□□□ 0.83
HCFC2-205ENST00000550444 TTLL4Q14679 1199 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 FAM47CQ5HY64 1035 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 VPS53Q5VIR6 699 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 OR6J1Q8NGC5 347 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 MORC4Q8TE76 937 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 RANBP17Q9H2T7 1088 aaKnown RBP20.26■□□□□ 0.83
HCFC2-205ENST00000550444 POLR3EQ9NVU0 708 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 PCDHA11Q9Y5I1 949 aa20.26■□□□□ 0.83
HCFC2-205ENST00000550444 FRMPD2Q68DX3 1309 aaPredicted RBP20.26■□□□□ 0.83
HCFC2-205ENST00000550444 MYO9BQ13459 2157 aa20.25■□□□□ 0.83
HCFC2-205ENST00000550444 NFIBO00712 420 aa20.25■□□□□ 0.83
HCFC2-205ENST00000550444 CALML3P27482 149 aa20.25■□□□□ 0.83
HCFC2-205ENST00000550444 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
HCFC2-205ENST00000550444 SYDE2Q5VT97 1194 aa20.25■□□□□ 0.83
HCFC2-205ENST00000550444 PPP1R13LQ8WUF5 828 aa20.25■□□□□ 0.83
HCFC2-205ENST00000550444 TNKSO95271 1327 aa20.25■□□□□ 0.83
HCFC2-205ENST00000550444 MX1P20591 662 aa20.24■□□□□ 0.83
HCFC2-205ENST00000550444 CPT1AP50416 773 aa20.24■□□□□ 0.83
HCFC2-205ENST00000550444 PURAQ00577 322 aaKnown RBP20.24■□□□□ 0.83
HCFC2-205ENST00000550444 SKIV2LQ15477 1246 aaKnown RBP20.24■□□□□ 0.83
HCFC2-205ENST00000550444 VWCEQ96DN2 955 aa20.24■□□□□ 0.83
HCFC2-205ENST00000550444 MTG1Q9BT17 334 aaPredicted RBP20.24■□□□□ 0.83
HCFC2-205ENST00000550444 CERS4Q9HA82 394 aa20.24■□□□□ 0.83
HCFC2-205ENST00000550444 RAPGEFL1Q9UHV5 662 aa20.24■□□□□ 0.83
HCFC2-205ENST00000550444 RFXAPO00287 272 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 NBPF20Q3BBV1 942 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 TMEM67Q5HYA8 995 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 SLC30A10Q6XR72 485 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 TMEM47Q9BQJ4 181 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 ANAPC4Q9UJX5 808 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 PCDHB15Q9Y5E8 787 aa20.23■□□□□ 0.83
HCFC2-205ENST00000550444 PFKMP08237 780 aa20.22■□□□□ 0.83
HCFC2-205ENST00000550444 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
HCFC2-205ENST00000550444 CHMP4BP1P59074 171 aa20.22■□□□□ 0.83
HCFC2-205ENST00000550444 PDE4DQ08499 809 aa20.22■□□□□ 0.83
HCFC2-205ENST00000550444 BRDTQ58F21 947 aaPredicted RBP20.22■□□□□ 0.83
HCFC2-205ENST00000550444 BTNL9Q6UXG8 535 aa20.22■□□□□ 0.83
HCFC2-205ENST00000550444 RNF207Q6ZRF8 634 aa20.22■□□□□ 0.83
HCFC2-205ENST00000550444 RETREG2Q8NC44 543 aa20.22■□□□□ 0.83
HCFC2-205ENST00000550444 FTOQ9C0B1 505 aaKnown RBP eCLIP20.22■□□□□ 0.83
HCFC2-205ENST00000550444 RBM47A0AV96 593 aaKnown RBP20.21■□□□□ 0.83
HCFC2-205ENST00000550444 ORC4O43929 436 aa20.21■□□□□ 0.83
HCFC2-205ENST00000550444 CA3P07451 260 aa20.21■□□□□ 0.83
HCFC2-205ENST00000550444 ACTN1P12814 892 aa20.21■□□□□ 0.83
HCFC2-205ENST00000550444 NOVP48745 357 aa20.21■□□□□ 0.83
HCFC2-205ENST00000550444 TFF2Q03403 129 aa20.21■□□□□ 0.83
HCFC2-205ENST00000550444 CLEC4DQ8WXI8 215 aa20.21■□□□□ 0.83
HCFC2-205ENST00000550444 NECAB3Q96P71 396 aaPredicted RBP20.21■□□□□ 0.83
HCFC2-205ENST00000550444 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
HCFC2-205ENST00000550444 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
HCFC2-205ENST00000550444 COPS5Q92905 334 aa20.2■□□□□ 0.82
HCFC2-205ENST00000550444 MPHOSPH6Q99547 160 aaKnown RBP20.2■□□□□ 0.82
HCFC2-205ENST00000550444 RAD50Q92878 1312 aa20.2■□□□□ 0.82
HCFC2-205ENST00000550444 LRRC37A2A6NM11 1700 aa20.19■□□□□ 0.82
HCFC2-205ENST00000550444 LOC102724159A0A0B4J2E5 919 aa20.19■□□□□ 0.82
HCFC2-205ENST00000550444 GTPBP6O43824 516 aaPredicted RBP20.19■□□□□ 0.82
HCFC2-205ENST00000550444 RPS6P62753 249 aaKnown RBP20.19■□□□□ 0.82
HCFC2-205ENST00000550444 PWP2Q15269 919 aaKnown RBP20.19■□□□□ 0.82
HCFC2-205ENST00000550444 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
HCFC2-205ENST00000550444 NOD1Q9Y239 953 aa20.19■□□□□ 0.82
HCFC2-205ENST00000550444 NKRFO15226 690 aaKnown RBP eCLIP20.18■□□□□ 0.82
HCFC2-205ENST00000550444 FGAP02671 866 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 FGRP09769 529 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 IQCF3P0C7M6 154 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 PDHBP11177 359 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 ALX1Q15699 326 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 ANKRD45Q5TZF3 282 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 HELLSQ9NRZ9 838 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 MTCH2Q9Y6C9 303 aa20.18■□□□□ 0.82
HCFC2-205ENST00000550444 KPNA6O60684 536 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 TXNP10599 105 aaKnown RBP20.17■□□□□ 0.82
HCFC2-205ENST00000550444 BMP1P13497 986 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 RFC2P35250 354 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 KCNQ1P51787 676 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 HAND2P61296 217 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 AAK1Q2M2I8 961 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 NFRKBQ6P4R8 1299 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 SCFD2Q8WU76 684 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 ARNTL2Q8WYA1 636 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 SLC9A7Q96T83 725 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 TCP11L1Q9NUJ3 509 aa20.17■□□□□ 0.82
HCFC2-205ENST00000550444 MUC3AQ02505 3323 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms