RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 EEPD1Q7L9B9 569 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 RNF180Q86T96 592 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 FBXO16Q8IX29 292 aaPredicted RBP20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 KLHDC9Q8NEP7 349 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 MAF1Q9H063 256 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 COL20A1Q9P218 1284 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 PHF24Q9UPV7 400 aa20.88■□□□□ 0.93
TUBA1A-206ENST00000550254 MYADML2A6NDP7 307 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 RXRAP19793 462 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 ATN1P54259 1190 aaPredicted RBP20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 TMEM63BQ5T3F8 832 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 CCSAPQ6IQ19 270 aaPredicted RBP20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 SLC39A5Q6ZMH5 540 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 DHX32Q7L7V1 743 aaKnown RBP20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 SGMS1Q86VZ5 419 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 DNERQ8NFT8 737 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 SYTL5Q8TDW5 730 aaPredicted RBP20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 FERMT2Q96AC1 680 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 TCEANC2Q96MN5 208 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 UPF3AQ9H1J1 476 aaKnown RBP20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 VTA1Q9NP79 307 aa20.87■□□□□ 0.93
TUBA1A-206ENST00000550254 CTAGE5O15320 804 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 PTGS1P23219 599 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 EDNRBP24530 442 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 GJA9P57773 515 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 TNFAIP2Q03169 654 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 KRT32Q14532 448 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 MCF2L2Q86YR7 1114 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 RAB11FIP4Q86YS3 637 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 TAAR1Q96RJ0 339 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 GNEQ9Y223 722 aaKnown RBP20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 PCDHA1Q9Y5I3 950 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 SNX14Q9Y5W7 946 aa20.86■□□□□ 0.93
TUBA1A-206ENST00000550254 PNMA6FA0A0J9YX94 578 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 PLEKHA8P1O95397 391 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 SMPD1P17405 629 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 KIF5BP33176 963 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 GHRHRQ02643 423 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 IQSEC1Q6DN90 963 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 TSEN34Q9BSV6 310 aaKnown RBP20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 SPZ1Q9BXG8 430 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 ZMYND8Q9ULU4 1186 aaPredicted RBP20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 COLQQ9Y215 455 aaPredicted RBP20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 SLC12A7Q9Y666 1083 aa20.85■□□□□ 0.93
TUBA1A-206ENST00000550254 REC8O95072 547 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 CFBP00751 764 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 C6orf222P0C671 652 aaPredicted RBP20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 CALM1P0DP23 149 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 CALM2P0DP24 149 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 CALM3P0DP25 149 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 CST5P28325 142 aaPredicted RBP20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 SMARCA1P28370 1054 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 HSD17B4P51659 736 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 NKX3-2P78367 333 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 SNX17Q15036 470 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 KCNA10Q16322 511 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 CMTR1Q8N1G2 835 aaKnown RBP20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 SRBD1Q8N5C6 995 aaKnown RBP20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 PIBF1Q8WXW3 757 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 DNAH12Q6ZR08 3092 aa20.84■□□□□ 0.93
TUBA1A-206ENST00000550254 A0A1W2PQ45 241 aaPredicted RBP20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 A0A1W2PQY0 241 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 RBM47A0AV96 593 aaKnown RBP20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 CPA1P15085 419 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 SYN1P17600 705 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 ACLYP53396 1101 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 RTP1P59025 263 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 PDE4DQ08499 809 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 CHRDL2Q6WN34 429 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 LZTS2Q9BRK4 669 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 PRO3102Q9H379 93 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 PCDH10Q9P2E7 1040 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 BRPF3Q9ULD4 1205 aa20.83■□□□□ 0.93
TUBA1A-206ENST00000550254 MOXD2PA6NHM9 499 aa20.82■□□□□ 0.92
TUBA1A-206ENST00000550254 GNAQP50148 359 aa20.82■□□□□ 0.92
TUBA1A-206ENST00000550254 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
TUBA1A-206ENST00000550254 APOA5Q6Q788 366 aa20.82■□□□□ 0.92
TUBA1A-206ENST00000550254 EPB41L2O43491 1005 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 ASGR1P07306 291 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 HMGB1P09429 215 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 BEX3Q00994 111 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 TRAF1Q13077 416 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 TRIM60Q495X7 471 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 DUSP28Q4G0W2 176 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 NOL8Q76FK4 1167 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 TLK2Q86UE8 772 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 MICU3Q86XE3 530 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 NSUN6Q8TEA1 469 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 JAKMIP1Q96N16 626 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 RMDN3Q96TC7 470 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 MPHOSPH6Q99547 160 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 USP26Q9BXU7 913 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 WDR11Q9BZH6 1224 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 SPC25Q9HBM1 224 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 MAP3K20Q9NYL2 800 aaKnown RBP20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 ATP11BQ9Y2G3 1177 aa20.81■□□□□ 0.92
TUBA1A-206ENST00000550254 Q9Y3F1 56 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms