RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 TRIM60Q495X7 471 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 HABP4Q5JVS0 413 aaKnown RBP11.39□□□□□ -0.59
HDAC7-229ENST00000549883 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
HDAC7-229ENST00000549883 SLC39A5Q6ZMH5 540 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 KLHDC9Q8NEP7 349 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 SYTL5Q8TDW5 730 aaPredicted RBP11.39□□□□□ -0.59
HDAC7-229ENST00000549883 TAAR1Q96RJ0 339 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 PRO3102Q9H379 93 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 RIOX1Q9H6W3 641 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 RBM27Q9P2N5 1060 aaKnown RBP11.39□□□□□ -0.59
HDAC7-229ENST00000549883 PHF24Q9UPV7 400 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
HDAC7-229ENST00000549883 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 ABCB11O95342 1321 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 ZBTB5O15062 677 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 DUSP11O75319 330 aaKnown RBP11.38□□□□□ -0.59
HDAC7-229ENST00000549883 TNFAIP2Q03169 654 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 SART3Q15020 963 aaKnown RBP11.38□□□□□ -0.59
HDAC7-229ENST00000549883 KCNA10Q16322 511 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 NEK1Q96PY6 1258 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
HDAC7-229ENST00000549883 BRPF3Q9ULD4 1205 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 ATP11BQ9Y2G3 1177 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 MYH7BA7E2Y1 1941 aa11.38□□□□□ -0.59
HDAC7-229ENST00000549883 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 hCG_1642624A0A1W2PR95 340 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 C6orf222P0C671 652 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 EDNRBP24530 442 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 HOXA13P31271 388 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 ACLYP53396 1101 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 GJA9P57773 515 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 NFXL1Q6ZNB6 911 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 NOL8Q76FK4 1167 aaKnown RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 SH3RF1Q7Z6J0 888 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 RNF180Q86T96 592 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 COPS5Q92905 334 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 KCNB2Q92953 911 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 ZFP91Q96JP5 570 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 TMEM87BQ96K49 555 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 AMNQ9BXJ7 453 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 ADD3Q9UEY8 706 aaKnown RBP11.37□□□□□ -0.59
HDAC7-229ENST00000549883 PCDHA1Q9Y5I3 950 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 SNX14Q9Y5W7 946 aa11.37□□□□□ -0.59
HDAC7-229ENST00000549883 DOCK5Q9H7D0 1870 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-229ENST00000549883 DDAH1O94760 285 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 ARIH2O95376 493 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 CFBP00751 764 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 CENPBP07199 599 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-229ENST00000549883 ASGR1P07306 291 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 HSPA4P34932 840 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 LIFRP42702 1097 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 MAGEA10P43363 369 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-229ENST00000549883 TLE2Q04725 743 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 PDE4DQ08499 809 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 SNX17Q15036 470 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 TLK2Q86UE8 772 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 GDF15Q99988 308 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 PNMA2Q9UL42 364 aa11.36□□□□□ -0.59
HDAC7-229ENST00000549883 MRPL11Q9Y3B7 192 aaKnown RBP11.36□□□□□ -0.59
HDAC7-229ENST00000549883 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 PNMA6FA0A0J9YX94 578 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 TRIM43BA6NCK2 446 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 ITGB8P26012 769 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 CST5P28325 142 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 HSD17B4P51659 736 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 IQSEC1Q6DN90 963 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 CXCL17Q6UXB2 119 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 SGMS1Q86VZ5 419 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 MICU3Q86XE3 530 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 IL31RAQ8NI17 732 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 CTCFLQ8NI51 663 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 PPP1R13LQ8WUF5 828 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 TRIM43Q96BQ3 446 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 JAKMIP1Q96N16 626 aaKnown RBP11.35□□□□□ -0.59
HDAC7-229ENST00000549883 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
HDAC7-229ENST00000549883 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
HDAC7-229ENST00000549883 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
HDAC7-229ENST00000549883 FXR1P51114 621 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC7-229ENST00000549883 NKX3-2P78367 333 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 GHRHRQ02643 423 aa11.34□□□□□ -0.59
HDAC7-229ENST00000549883 FSCN1Q16658 493 aaKnown RBP11.34□□□□□ -0.59
HDAC7-229ENST00000549883 DUSP28Q4G0W2 176 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms