RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SREBF1P36956 1147 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 GRB10Q13322 594 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 CCAR2Q8N163 923 aaKnown RBP11.25□□□□□ -0.61
RAB5B-206ENST00000549505 PANX2Q96RD6 677 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 BLOC1S4Q9NUP1 217 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 ATP2B1P20020 1258 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 UBA7P41226 1012 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 AMPD3Q01432 767 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 PSMD2Q13200 908 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 SPECC1LQ69YQ0 1117 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 PDILTQ8N807 584 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 CCDC51Q96ER9 411 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 TMEM260Q9NX78 707 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 PIM2Q9P1W9 311 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 CCP110O43303 1012 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 SKILP12757 684 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 MUTP22033 750 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 KARSQ15046 597 aaKnown RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 CDC37Q16543 378 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 CALCRLQ16602 461 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 DRC7Q8IY82 874 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 COA7Q96BR5 231 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 PAXBP1Q9Y5B6 917 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 DICER1Q9UPY3 1922 aaKnown RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 OPLAHO14841 1288 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 SLC37A4O43826 429 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 BMP3P12645 472 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 SLC1A4P43007 532 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 PAK1Q13153 545 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 FRMPD4Q14CM0 1322 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 ZC3H3Q8IXZ2 948 aaKnown RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 ETNPPLQ8TBG4 499 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 NAA15Q9BXJ9 866 aaKnown RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 TMOD2Q9NZR1 351 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 ZHX1Q9UKY1 873 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-206ENST00000549505 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
RAB5B-206ENST00000549505 A0A1W2PQC6 194 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 A0A1W2PRG0 241 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 CTIFO43310 598 aaKnown RBP11.23□□□□□ -0.61
RAB5B-206ENST00000549505 STX10O60499 249 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 PLCG1P19174 1290 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
RAB5B-206ENST00000549505 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 SPIRE1Q08AE8 756 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 TMEM266Q2M3C6 531 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 LETM2Q2VYF4 491 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 KMT5BQ4FZB7 885 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 TTI2Q6NXR4 508 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 FAM160B2Q86V87 743 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
RAB5B-206ENST00000549505 TRIM14Q14142 442 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 E4F1Q66K89 784 aaPredicted RBP11.23□□□□□ -0.61
RAB5B-206ENST00000549505 IRF2BP1Q8IU81 584 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 LENG9Q96B70 501 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 CSRNP1Q96S65 589 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 PDGFDQ9GZP0 370 aaPredicted RBP11.23□□□□□ -0.61
RAB5B-206ENST00000549505 ARHGEF10LQ9HCE6 1279 aa11.23□□□□□ -0.61
RAB5B-206ENST00000549505 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
RAB5B-206ENST00000549505 CAP2P40123 477 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 AFMP43652 599 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 TMC6Q7Z403 805 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 TC2NQ8N9U0 490 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 RAD54LQ92698 747 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 IQCDQ96DY2 449 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 FAM20AQ96MK3 541 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 SERPINC1P01008 464 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.61
RAB5B-206ENST00000549505 PRCPP42785 496 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 TNIP1Q15025 636 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-206ENST00000549505 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-206ENST00000549505 LARGE2Q8N3Y3 721 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 ZNF507Q8TCN5 953 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 NT5C3AQ9H0P0 336 aa11.22□□□□□ -0.61
RAB5B-206ENST00000549505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms