RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 CLTBP09497 229 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 CALML3P27482 149 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 ALDH5A1P51649 535 aaPredicted RBP13.28□□□□□ -0.28
BEST3-209ENST00000548658 PTH1RQ03431 593 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 SEC23AQ15436 765 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 GNEQ9Y223 722 aaKnown RBP13.28□□□□□ -0.28
BEST3-209ENST00000548658 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
BEST3-209ENST00000548658 MCM3APO60318 1980 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 KLRF2D3W0D1 207 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 E7EWF7 191 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 ADCY6O43306 1168 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
BEST3-209ENST00000548658 PDE4DQ08499 809 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 FSCN1Q16658 493 aaKnown RBP13.27□□□□□ -0.29
BEST3-209ENST00000548658 USH1GQ495M9 461 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 DUSP28Q4G0W2 176 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 EEPD1Q7L9B9 569 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 TLK2Q86UE8 772 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 FBXO11Q86XK2 927 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 MTA3Q9BTC8 594 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 AMNQ9BXJ7 453 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 TMEM39AQ9NV64 488 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 MAP3K20Q9NYL2 800 aaKnown RBP13.27□□□□□ -0.29
BEST3-209ENST00000548658 ASTN1O14525 1302 aa13.27□□□□□ -0.29
BEST3-209ENST00000548658 A0A0U1RQG5 324 aaPredicted RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 MYADML2A6NDP7 307 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 KIAA0355O15063 1070 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 NKRFO15226 690 aaKnown RBP eCLIP13.26□□□□□ -0.29
BEST3-209ENST00000548658 DYNC1LI2O43237 492 aaPredicted RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 RAG1P15918 1043 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 SMPD1P17405 629 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 WTAPQ15007 396 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 QRICH1Q2TAL8 776 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 BRDTQ58F21 947 aaPredicted RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 BMP2KLQ5H9B9 411 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 SLC30A10Q6XR72 485 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 CYB5R4Q7L1T6 521 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 FBXO16Q8IX29 292 aaPredicted RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 SAMD3Q8N6K7 520 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 NSUN6Q8TEA1 469 aaKnown RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 CPVLQ9H3G5 476 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 VAT1LQ9HCJ6 419 aa13.26□□□□□ -0.29
BEST3-209ENST00000548658 RBM8AQ9Y5S9 174 aaKnown RBP13.26□□□□□ -0.29
BEST3-209ENST00000548658 RBM47A0AV96 593 aaKnown RBP13.25□□□□□ -0.29
BEST3-209ENST00000548658 TRIM43BA6NCK2 446 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
BEST3-209ENST00000548658 ARVCFO00192 962 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 ZBTB5O15062 677 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 TLR3O15455 904 aaKnown RBP13.25□□□□□ -0.29
BEST3-209ENST00000548658 EDNRBP24530 442 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 CDK7P50613 346 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 SCFD2Q8WU76 684 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 BADQ92934 168 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
BEST3-209ENST00000548658 IWS1Q96ST2 819 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 PDGFCQ9NRA1 345 aa13.25□□□□□ -0.29
BEST3-209ENST00000548658 CTAGE5O15320 804 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 CPT1AP50416 773 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 GRM4Q14833 912 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 STAG2Q8N3U4 1231 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 MAP3K14Q99558 947 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
BEST3-209ENST00000548658 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
BEST3-209ENST00000548658 KPNA6O60684 536 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 KIF5BP33176 963 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 MCM5P33992 734 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 BEX3Q00994 111 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 TROAPQ12815 778 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 TTLL4Q14679 1199 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 PPP2R5BQ15173 497 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 STXBP2Q15833 593 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 SYTL5Q8TDW5 730 aaPredicted RBP13.23□□□□□ -0.29
BEST3-209ENST00000548658 IGDCC4Q8TDY8 1250 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 TMEM87BQ96K49 555 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 RMDN3Q96TC7 470 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 GPHNQ9NQX3 736 aaPredicted RBP13.23□□□□□ -0.29
BEST3-209ENST00000548658 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
BEST3-209ENST00000548658 TIMP1P01033 207 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
BEST3-209ENST00000548658 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms