RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 RILPL1Q5EBL4 403 aa32.89■■■□□ 2.86
BRF1-213ENST00000548421 ATL3Q6DD88 541 aa32.89■■■□□ 2.86
BRF1-213ENST00000548421 CHST13Q8NET6 341 aa32.89■■■□□ 2.86
BRF1-213ENST00000548421 CHAMP1Q96JM3 812 aa32.89■■■□□ 2.86
BRF1-213ENST00000548421 ACAD9Q9H845 621 aa32.89■■■□□ 2.86
BRF1-213ENST00000548421 COPB2P35606 906 aa32.88■■■□□ 2.85
BRF1-213ENST00000548421 ERVK-9P63128 1117 aa32.88■■■□□ 2.85
BRF1-213ENST00000548421 ERVK-24P63145 666 aa32.88■■■□□ 2.85
BRF1-213ENST00000548421 NONOQ15233 471 aaKnown RBP eCLIP32.88■■■□□ 2.855e-6■■■■□ 20.4
BRF1-213ENST00000548421 MOV10L1Q9BXT6 1211 aaKnown RBP32.88■■■□□ 2.85
BRF1-213ENST00000548421 MAP3K20Q9NYL2 800 aaKnown RBP32.88■■■□□ 2.85
BRF1-213ENST00000548421 NOL7Q9UMY1 257 aaKnown RBP32.88■■■□□ 2.85
BRF1-213ENST00000548421 SLC25A27O95847 323 aa32.87■■■□□ 2.85
BRF1-213ENST00000548421 HOXA13P31271 388 aaPredicted RBP32.87■■■□□ 2.85
BRF1-213ENST00000548421 HSD17B4P51659 736 aa32.87■■■□□ 2.85
BRF1-213ENST00000548421 KRT85P78386 507 aa32.87■■■□□ 2.85
BRF1-213ENST00000548421 TAF1CQ15572 869 aaPredicted RBP32.87■■■□□ 2.85
BRF1-213ENST00000548421 TBC1D5Q92609 795 aa32.87■■■□□ 2.85
BRF1-213ENST00000548421 MAF1Q9H063 256 aa32.87■■■□□ 2.85
BRF1-213ENST00000548421 FBXO40Q9UH90 709 aa32.87■■■□□ 2.85
BRF1-213ENST00000548421 SPDYE3A6NKU9 549 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 FOSP01100 380 aaPredicted RBP32.86■■■□□ 2.85
BRF1-213ENST00000548421 REM2Q8IYK8 340 aaPredicted RBP32.86■■■□□ 2.85
BRF1-213ENST00000548421 GPRC5AQ8NFJ5 357 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 MORF4L1Q9UBU8 362 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 MYH7BA7E2Y1 1941 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 AOC2O75106 756 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 NCLP19338 710 aaKnown RBP32.86■■■□□ 2.85
BRF1-213ENST00000548421 TRAPPC10P48553 1259 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 Q3C1V9 767 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 ANKRD13CQ8N6S4 541 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 CFAP45Q9UL16 551 aa32.86■■■□□ 2.85
BRF1-213ENST00000548421 TOB1P50616 345 aaPredicted RBP32.85■■■□□ 2.85
BRF1-213ENST00000548421 RNF207Q6ZRF8 634 aa32.85■■■□□ 2.85
BRF1-213ENST00000548421 NCAPG2Q86XI2 1143 aa32.85■■■□□ 2.85
BRF1-213ENST00000548421 PGBD1Q96JS3 809 aa32.85■■■□□ 2.85
BRF1-213ENST00000548421 ANO3Q9BYT9 981 aa32.85■■■□□ 2.85
BRF1-213ENST00000548421 ADGRA2Q96PE1 1338 aa32.84■■■□□ 2.85
BRF1-213ENST00000548421 CCNA1P78396 465 aa32.84■■■□□ 2.85
BRF1-213ENST00000548421 INF2Q27J81 1249 aa32.84■■■□□ 2.85
BRF1-213ENST00000548421 NSMFQ6X4W1 530 aa32.84■■■□□ 2.85
BRF1-213ENST00000548421 USP28Q96RU2 1077 aa32.84■■■□□ 2.85
BRF1-213ENST00000548421 CNPY2Q9Y2B0 182 aa32.84■■■□□ 2.85
BRF1-213ENST00000548421 ERCC3P19447 782 aa32.83■■■□□ 2.85
BRF1-213ENST00000548421 FAM110CQ1W6H9 321 aa32.83■■■□□ 2.85
BRF1-213ENST00000548421 SHCBP1Q8NEM2 672 aa32.83■■■□□ 2.85
BRF1-213ENST00000548421 TBCKQ8TEA7 893 aa32.83■■■□□ 2.85
BRF1-213ENST00000548421 TFIP11Q9UBB9 837 aaKnown RBP32.83■■■□□ 2.85
BRF1-213ENST00000548421 RPS6P62753 249 aaKnown RBP32.82■■■□□ 2.84
BRF1-213ENST00000548421 FCHSD1Q86WN1 690 aa32.82■■■□□ 2.84
BRF1-213ENST00000548421 MROH8Q9H579 483 aa32.82■■■□□ 2.84
BRF1-213ENST00000548421 ZFYVE28Q9HCC9 887 aa32.82■■■□□ 2.84
BRF1-213ENST00000548421 ALDH1A1P00352 501 aa32.81■■■□□ 2.84
BRF1-213ENST00000548421 SLC30A10Q6XR72 485 aa32.81■■■□□ 2.84
BRF1-213ENST00000548421 NEK8Q86SG6 692 aa32.81■■■□□ 2.84
BRF1-213ENST00000548421 FTOQ9C0B1 505 aaKnown RBP eCLIP32.81■■■□□ 2.84
BRF1-213ENST00000548421 A1CFQ9NQ94 594 aaKnown RBP32.81■■■□□ 2.84
BRF1-213ENST00000548421 POLR3EQ9NVU0 708 aa32.81■■■□□ 2.84
BRF1-213ENST00000548421 ATP2B1P20020 1258 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 CEBPZQ03701 1054 aaKnown RBP32.8■■■□□ 2.84
BRF1-213ENST00000548421 TTC38Q5R3I4 469 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 ANO1Q5XXA6 986 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.8■■■□□ 2.84
BRF1-213ENST00000548421 SYTL5Q8TDW5 730 aaPredicted RBP32.8■■■□□ 2.84
BRF1-213ENST00000548421 SCAND2PQ9GZW5 306 aaPredicted RBP32.8■■■□□ 2.84
BRF1-213ENST00000548421 EHMT1Q9H9B1 1298 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 RTEL1Q9NZ71 1219 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 PFASO15067 1338 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 HTRA3P83110 453 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 BAATQ14032 418 aaPredicted RBP32.8■■■□□ 2.84
BRF1-213ENST00000548421 NBR1Q14596 966 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 CYP39A1Q9NYL5 469 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 CLIC4Q9Y696 253 aa32.8■■■□□ 2.84
BRF1-213ENST00000548421 FIBPO43427 364 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 TLR2O60603 784 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 ANKRD35Q8N283 1001 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 COL20A1Q9P218 1284 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 CPA4Q9UI42 421 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 PCDHB6Q9Y5E3 794 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 THSD7BQ9C0I4 1608 aa32.79■■■□□ 2.84
BRF1-213ENST00000548421 BCRP11274 1271 aa32.78■■■□□ 2.84
BRF1-213ENST00000548421 MAP2K2P36507 400 aa32.78■■■□□ 2.84
BRF1-213ENST00000548421 SREBF1P36956 1147 aa32.78■■■□□ 2.84
BRF1-213ENST00000548421 NASPP49321 788 aaPredicted RBP32.78■■■□□ 2.84
BRF1-213ENST00000548421 VEGFBP49765 207 aa32.78■■■□□ 2.84
BRF1-213ENST00000548421 SF3A1Q15459 793 aaKnown RBP32.78■■■□□ 2.84
BRF1-213ENST00000548421 PORCNQ9H237 461 aa32.78■■■□□ 2.84
BRF1-213ENST00000548421 LCTP09848 1927 aa32.78■■■□□ 2.84
BRF1-213ENST00000548421 CA12O43570 354 aa32.77■■■□□ 2.84
BRF1-213ENST00000548421 CRHR2Q13324 411 aa32.77■■■□□ 2.84
BRF1-213ENST00000548421 PLXNB2O15031 1838 aa32.77■■■□□ 2.84
BRF1-213ENST00000548421 GOLGA6L22H0YM25 854 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 WNT7AO00755 349 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 YEATS4O95619 227 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 CSPP1Q1MSJ5 1256 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 LETM2Q2VYF4 491 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 SPATA32Q96LK8 384 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 GDPD2Q9HCC8 539 aa32.76■■■□□ 2.84
BRF1-213ENST00000548421 EIF4ENIF1Q9NRA8 985 aaKnown RBP32.76■■■□□ 2.84
BRF1-213ENST00000548421 CEP131Q9UPN4 1083 aa32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms