RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 FTOQ9C0B1 505 aaKnown RBP eCLIP19.51■□□□□ 0.71
CADM1-220ENST00000546000 BRMS1Q9HCU9 246 aa19.51■□□□□ 0.71
CADM1-220ENST00000546000 MORF4L1Q9UBU8 362 aa19.51■□□□□ 0.71
CADM1-220ENST00000546000 ZSWIM8A7E2V4 1837 aa19.51■□□□□ 0.71
CADM1-220ENST00000546000 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.719e-7■■□□□ 14.5
CADM1-220ENST00000546000 GNA11P29992 359 aa19.5■□□□□ 0.71
CADM1-220ENST00000546000 GCLCP48506 637 aaPredicted RBP19.5■□□□□ 0.71
CADM1-220ENST00000546000 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
CADM1-220ENST00000546000 FCHSD1Q86WN1 690 aa19.5■□□□□ 0.71
CADM1-220ENST00000546000 NOSTRINQ8IVI9 506 aa19.5■□□□□ 0.71
CADM1-220ENST00000546000 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
CADM1-220ENST00000546000 TNPO1Q92973 898 aaKnown RBP19.5■□□□□ 0.71
CADM1-220ENST00000546000 FOXP1Q9H334 677 aaPredicted RBP19.5■□□□□ 0.71
CADM1-220ENST00000546000 ACAD9Q9H845 621 aa19.5■□□□□ 0.71
CADM1-220ENST00000546000 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
CADM1-220ENST00000546000 GCOM1H8Y6P7 765 aaPredicted RBP19.49■□□□□ 0.71
CADM1-220ENST00000546000 POLR2MP0CAP2 368 aa19.49■□□□□ 0.71
CADM1-220ENST00000546000 HSPA1AP0DMV8 641 aaKnown RBP19.49■□□□□ 0.71
CADM1-220ENST00000546000 HSPA1BP0DMV9 641 aaKnown RBP19.49■□□□□ 0.71
CADM1-220ENST00000546000 MRPL12P52815 198 aaKnown RBP19.49■□□□□ 0.71
CADM1-220ENST00000546000 FAM110CQ1W6H9 321 aa19.49■□□□□ 0.71
CADM1-220ENST00000546000 TKFCQ3LXA3 575 aa19.49■□□□□ 0.71
CADM1-220ENST00000546000 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
CADM1-220ENST00000546000 ZFYVE28Q9HCC9 887 aa19.49■□□□□ 0.71
CADM1-220ENST00000546000 TLR2O60603 784 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 TBC1D8O95759 1140 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 ATP2B1P20020 1258 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 HSD17B4P51659 736 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 RPS6P62753 249 aaKnown RBP19.48■□□□□ 0.71
CADM1-220ENST00000546000 TRAF1Q13077 416 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 BAATQ14032 418 aaPredicted RBP19.48■□□□□ 0.71
CADM1-220ENST00000546000 GALNT17Q6IS24 598 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 C17orf99Q6UX52 265 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 RGS22Q8NE09 1264 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 SYTL5Q8TDW5 730 aaPredicted RBP19.48■□□□□ 0.71
CADM1-220ENST00000546000 ANO3Q9BYT9 981 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 DDX49Q9Y6V7 483 aaKnown RBP19.48■□□□□ 0.71
CADM1-220ENST00000546000 PLXNB2O15031 1838 aa19.48■□□□□ 0.71
CADM1-220ENST00000546000 CCDC194A0A1B0GVG4 234 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 CA12O43570 354 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 UBXN2AP68543 259 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 DNM1Q05193 864 aaKnown RBP19.47■□□□□ 0.71
CADM1-220ENST00000546000 INF2Q27J81 1249 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 MYSM1Q5VVJ2 828 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 RNF207Q6ZRF8 634 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 KRT25Q7Z3Z0 450 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 CHST13Q8NET6 341 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 CYP39A1Q9NYL5 469 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 PNMA2Q9UL42 364 aa19.47■□□□□ 0.71
CADM1-220ENST00000546000 PIK3CDO00329 1044 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 EDIL3O43854 480 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 SLC25A27O95847 323 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 MAP2K2P36507 400 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 TOB1P50616 345 aaPredicted RBP19.46■□□□□ 0.71
CADM1-220ENST00000546000 GHRHRQ02643 423 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 BRAPQ7Z569 592 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 ZSCAN16Q9H4T2 348 aaPredicted RBP19.46■□□□□ 0.71
CADM1-220ENST00000546000 RNF186Q9NXI6 227 aa19.46■□□□□ 0.71
CADM1-220ENST00000546000 TRPA1O75762 1119 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 PGK2P07205 417 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 CNTN2Q02246 1040 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 NONOQ15233 471 aaKnown RBP eCLIP19.45■□□□□ 0.7
CADM1-220ENST00000546000 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 SHCBP1Q8NEM2 672 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 TBCKQ8TEA7 893 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 ZFP91Q96JP5 570 aaPredicted RBP19.45■□□□□ 0.7
CADM1-220ENST00000546000 TAAR1Q96RJ0 339 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 MMP19Q99542 508 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 ASTN1O14525 1302 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 MYH7BA7E2Y1 1941 aa19.45■□□□□ 0.7
CADM1-220ENST00000546000 CTGFP29279 349 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 CCNA1P78396 465 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 CAP1Q01518 475 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
CADM1-220ENST00000546000 AP3B2Q13367 1082 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 ANKRD35Q8N283 1001 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 USP28Q96RU2 1077 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 GLT8D2Q9H1C3 349 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 TFIP11Q9UBB9 837 aaKnown RBP19.44■□□□□ 0.7
CADM1-220ENST00000546000 FBXO40Q9UH90 709 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 CLIC4Q9Y696 253 aa19.44■□□□□ 0.7
CADM1-220ENST00000546000 SPDYE3A6NKU9 549 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 ALDH1A1P00352 501 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 PDIA4P13667 645 aaKnown RBP19.43■□□□□ 0.7
CADM1-220ENST00000546000 NCLP19338 710 aaKnown RBP19.43■□□□□ 0.7
CADM1-220ENST00000546000 EIF2AK2P19525 551 aaKnown RBP19.43■□□□□ 0.7
CADM1-220ENST00000546000 COPB2P35606 906 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 GPR142Q7Z601 462 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 REM2Q8IYK8 340 aaPredicted RBP19.43■□□□□ 0.7
CADM1-220ENST00000546000 FGD4Q96M96 766 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 ARHGAP39Q9C0H5 1083 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 MROH8Q9H579 483 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 GDPD2Q9HCC8 539 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 PCDHB6Q9Y5E3 794 aa19.43■□□□□ 0.7
CADM1-220ENST00000546000 TDP2O95551 362 aa19.42■□□□□ 0.7
CADM1-220ENST00000546000 TTC38Q5R3I4 469 aa19.42■□□□□ 0.7
CADM1-220ENST00000546000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms