RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 RBM5P52756 815 aaKnown RBP eCLIP21.09■□□□□ 0.97
MSLN-202ENST00000545450 CACNB3P54284 484 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 CCDC178Q5BJE1 867 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 NOA1Q8NC60 698 aaKnown RBP21.09■□□□□ 0.97
MSLN-202ENST00000545450 FERMT2Q96AC1 680 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 MYO6Q9UM54 1294 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 PRPF3O43395 683 aaKnown RBP21.08■□□□□ 0.97
MSLN-202ENST00000545450 KRT31Q15323 416 aa21.08■□□□□ 0.97
MSLN-202ENST00000545450 ZFPM1Q8IX07 1006 aa21.08■□□□□ 0.97
MSLN-202ENST00000545450 MED4Q9NPJ6 270 aa21.08■□□□□ 0.97
MSLN-202ENST00000545450 SERPINA10Q9UK55 444 aa21.08■□□□□ 0.97
MSLN-202ENST00000545450 STX8Q9UNK0 236 aa21.08■□□□□ 0.97
MSLN-202ENST00000545450 V9GY48 417 aaPredicted RBP21.08■□□□□ 0.97
MSLN-202ENST00000545450 FAM205CA6NFA0 338 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 RNF225M0QZC1 329 aaPredicted RBP21.07■□□□□ 0.96
MSLN-202ENST00000545450 TGFB2P61812 414 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 HSP90B2PQ58FF3 399 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 TMEM47Q9BQJ4 181 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 FER1L6Q2WGJ9 1857 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 LRRIQ3A6PVS8 624 aaPredicted RBP21.07■□□□□ 0.96
MSLN-202ENST00000545450 BMP15O95972 392 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 POLD1P28340 1107 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 AKAP17AQ02040 695 aaKnown RBP21.07■□□□□ 0.96
MSLN-202ENST00000545450 TRIM14Q14142 442 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 R3HDM1Q15032 1099 aaKnown RBP21.07■□□□□ 0.96
MSLN-202ENST00000545450 LARGE2Q8N3Y3 721 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 PIM2Q9P1W9 311 aa21.07■□□□□ 0.96
MSLN-202ENST00000545450 N4BP3O15049 544 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 CCT6AP40227 531 aaKnown RBP21.06■□□□□ 0.96
MSLN-202ENST00000545450 EARS2Q5JPH6 523 aaKnown RBP21.06■□□□□ 0.96
MSLN-202ENST00000545450 CCDC102AQ96A19 550 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 ACBD3Q9H3P7 528 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 VIPAS39Q9H9C1 493 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 RSPH14Q9UHP6 348 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 CTNND2Q9UQB3 1225 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 STAG2Q8N3U4 1231 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 CEP95Q96GE4 821 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 PHF20Q9BVI0 1012 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 VPS54Q9P1Q0 977 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 SERPINB13Q9UIV8 391 aa21.06■□□□□ 0.96
MSLN-202ENST00000545450 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 GREB1LQ9C091 1923 aaPredicted RBP21.05■□□□□ 0.96
MSLN-202ENST00000545450 RAD17O75943 681 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 SLURP2P0DP57 97 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 CDC25AP30304 524 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 KIF5BP33176 963 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 SPAG1Q07617 926 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 GRM4Q14833 912 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 EFCC1Q9HA90 598 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 FAM198AQ9UFP1 575 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 MAD2L2Q9UI95 211 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 RWDD2AQ9UIY3 292 aa21.05■□□□□ 0.96
MSLN-202ENST00000545450 XBP1P17861 261 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 KRT2P35908 639 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 COPB1P53618 953 aaKnown RBP21.04■□□□□ 0.96
MSLN-202ENST00000545450 TCP10Q12799 353 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 NCAPH2Q6IBW4 605 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 NUP88Q99567 741 aaPredicted RBP21.04■□□□□ 0.96
MSLN-202ENST00000545450 SLF1Q9BQI6 1058 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 IDI2Q9BXS1 227 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 PSMD14O00487 310 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 AKR1B1P15121 316 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 AARSP49588 968 aaKnown RBP eCLIP21.04■□□□□ 0.96
MSLN-202ENST00000545450 FOXR1Q6PIV2 292 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 TRAPPC11Q7Z392 1133 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 IPO4Q8TEX9 1081 aaKnown RBP21.04■□□□□ 0.96
MSLN-202ENST00000545450 MTMR7Q9Y216 660 aa21.04■□□□□ 0.96
MSLN-202ENST00000545450 SHMT1P34896 483 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 KRT9P35527 623 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 NOVP48745 357 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 RSBN1LQ6PCB5 846 aaPredicted RBP21.03■□□□□ 0.96
MSLN-202ENST00000545450 CCDC148Q8NFR7 591 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 VPS16Q9H269 839 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 REXO2Q9Y3B8 237 aaKnown RBP21.03■□□□□ 0.96
MSLN-202ENST00000545450 EPN1Q9Y6I3 576 aaPredicted RBP21.03■□□□□ 0.96
MSLN-202ENST00000545450 WNT7AO00755 349 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 HLA-DOAP06340 250 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 TNNT3P45378 269 aaPredicted RBP21.03■□□□□ 0.96
MSLN-202ENST00000545450 E2F4Q16254 413 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 TCP11X2Q5H9J9 407 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 LRRC31Q6UY01 552 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 TDRD3Q9H7E2 651 aaKnown RBP21.03■□□□□ 0.96
MSLN-202ENST00000545450 PPP1R1BQ9UD71 204 aaPredicted RBP21.03■□□□□ 0.96
MSLN-202ENST00000545450 SWAP70Q9UH65 585 aa21.03■□□□□ 0.96
MSLN-202ENST00000545450 DDTLA6NHG4 134 aaPredicted RBP21.02■□□□□ 0.96
MSLN-202ENST00000545450 VIL1P09327 827 aaKnown RBP21.02■□□□□ 0.96
MSLN-202ENST00000545450 VEGFAP15692 232 aaPredicted RBP21.02■□□□□ 0.96
MSLN-202ENST00000545450 USP14P54578 494 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 MAPK8IP2Q13387 824 aaPredicted RBP21.02■□□□□ 0.96
MSLN-202ENST00000545450 SLC35G1Q2M3R5 365 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 RRAGBQ5VZM2 374 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 SH3BP5LQ7L8J4 393 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 ZBTB9Q96C00 473 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 DNAJC18Q9H819 358 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 TAB2Q9NYJ8 693 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 MYH4Q9Y623 1939 aa21.02■□□□□ 0.96
MSLN-202ENST00000545450 COBLO75128 1261 aa21.02■□□□□ 0.95
MSLN-202ENST00000545450 PHACTR2O75167 634 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms