RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
RTN3-214ENST00000545432 KRT40Q6A162 431 aa17.53■□□□□ 0.4
RTN3-214ENST00000545432 RCSD1Q6JBY9 416 aa17.53■□□□□ 0.4
RTN3-214ENST00000545432 KIAA1211Q6ZU35 1233 aa17.53■□□□□ 0.4
RTN3-214ENST00000545432 HERC6Q8IVU3 1022 aa17.53■□□□□ 0.4
RTN3-214ENST00000545432 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 SCN10AQ9Y5Y9 1956 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
RTN3-214ENST00000545432 GRB10Q13322 594 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.4
RTN3-214ENST00000545432 NFRKBQ6P4R8 1299 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 IFNL3Q8IZI9 196 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 MYH7P12883 1935 aa17.52■□□□□ 0.4
RTN3-214ENST00000545432 MYH4Q9Y623 1939 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 GPAA1O43292 621 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 BAIAP3O94812 1187 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 MS4A1P11836 297 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 ALAS1P13196 640 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 SLC1A4P43007 532 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 EEPD1Q7L9B9 569 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 DEFB128Q7Z7B8 93 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
RTN3-214ENST00000545432 WDR11Q9BZH6 1224 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 CERS4Q9HA82 394 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 CD320Q9NPF0 282 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
RTN3-214ENST00000545432 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.5■□□□□ 0.39
RTN3-214ENST00000545432 A6NJR5 290 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 KIF28PB7ZC32 967 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
RTN3-214ENST00000545432 MCCP23508 829 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 CPT1AP50416 773 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 TFAP4Q01664 338 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 GPNMBQ14956 572 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 PPP4R3BQ5MIZ7 849 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 ARNTL2Q8WYA1 636 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
RTN3-214ENST00000545432 ECHDC1Q9NTX5 307 aa17.5■□□□□ 0.39
RTN3-214ENST00000545432 NKRFO15226 690 aaKnown RBP eCLIP17.49■□□□□ 0.39
RTN3-214ENST00000545432 KPNA6O60684 536 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 ICAM1P05362 532 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 BTNL9Q6UXG8 535 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 TET1Q8NFU7 2136 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
RTN3-214ENST00000545432 RANBP17Q9H2T7 1088 aaKnown RBP17.49■□□□□ 0.39
RTN3-214ENST00000545432 ADD3Q9UEY8 706 aaKnown RBP17.49■□□□□ 0.39
RTN3-214ENST00000545432 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
RTN3-214ENST00000545432 EDNRBP24530 442 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 TDO2P48775 406 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 ALDH5A1P51649 535 aaPredicted RBP17.48■□□□□ 0.39
RTN3-214ENST00000545432 PDE4BQ07343 736 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 RBL2Q08999 1139 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 BAATQ14032 418 aaPredicted RBP17.48■□□□□ 0.39
RTN3-214ENST00000545432 LRRFIP1Q32MZ4 808 aaKnown RBP17.48■□□□□ 0.39
RTN3-214ENST00000545432 SPRED2Q7Z698 418 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 RETREG2Q8NC44 543 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
RTN3-214ENST00000545432 LCTP09848 1927 aa17.47■□□□□ 0.39
RTN3-214ENST00000545432 SCN5AQ14524 2016 aa17.47■□□□□ 0.39
RTN3-214ENST00000545432 M0R2C6 588 aa17.47■□□□□ 0.39
RTN3-214ENST00000545432 NSMFQ6X4W1 530 aa17.47■□□□□ 0.39
RTN3-214ENST00000545432 KCTD1Q719H9 257 aa17.47■□□□□ 0.39
RTN3-214ENST00000545432 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
RTN3-214ENST00000545432 PRR33A8MZF0 331 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 CXCL10P02778 98 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 MYL3P08590 195 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 SNAP25P60880 206 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 PPARAQ07869 468 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 BFSP2Q13515 415 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
RTN3-214ENST00000545432 CCPG1Q9ULG6 757 aa17.46■□□□□ 0.39
RTN3-214ENST00000545432 PARNO95453 639 aaKnown RBP17.45■□□□□ 0.38
RTN3-214ENST00000545432 FGRP09769 529 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 ERVK-21P61565 698 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 WDR5P61964 334 aaKnown RBP17.45■□□□□ 0.38
RTN3-214ENST00000545432 IKQ13123 557 aaPredicted RBP17.45■□□□□ 0.38
RTN3-214ENST00000545432 LEXMQ3ZCV2 418 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 OR6J1Q8NGC5 347 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 AFAP1L1Q8TED9 768 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 CLEC4DQ8WXI8 215 aa17.45■□□□□ 0.38
RTN3-214ENST00000545432 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
RTN3-214ENST00000545432 LCHNA4D1U4 455 aa17.44■□□□□ 0.38
RTN3-214ENST00000545432 NFIBO00712 420 aa17.44■□□□□ 0.38
RTN3-214ENST00000545432 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
RTN3-214ENST00000545432 APPP05067 770 aa17.44■□□□□ 0.38
RTN3-214ENST00000545432 SLC3A2P08195 630 aaKnown RBP17.44■□□□□ 0.38
RTN3-214ENST00000545432 BRDTQ58F21 947 aaPredicted RBP17.44■□□□□ 0.38
RTN3-214ENST00000545432 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
RTN3-214ENST00000545432 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
RTN3-214ENST00000545432 FTOQ9C0B1 505 aaKnown RBP eCLIP17.44■□□□□ 0.38
RTN3-214ENST00000545432 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
RTN3-214ENST00000545432 FOXP2O15409 715 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms