RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 HSP90AB4PQ58FF6 505 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.22□□□□□ -0.61
CHD4-212ENST00000545083 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 KIF1BPQ96EK5 621 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 STRBPQ96SI9 672 aaKnown RBP11.22□□□□□ -0.61
CHD4-212ENST00000545083 HAUS7Q99871 368 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■□□□□ 9
CHD4-212ENST00000545083 EPB41L4AQ9HCS5 686 aaPredicted RBP11.22□□□□□ -0.61
CHD4-212ENST00000545083 POLR3EQ9NVU0 708 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
CHD4-212ENST00000545083 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 STAT2P52630 851 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 WDR5P61964 334 aaKnown RBP11.21□□□□□ -0.61
CHD4-212ENST00000545083 DEFB103AP81534 67 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 GPNMBQ14956 572 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 TCTN1Q2MV58 587 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 LEXMQ3ZCV2 418 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.61
CHD4-212ENST00000545083 ANKS1AQ92625 1134 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 SNX27Q96L92 541 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 FBXL18Q96ME1 805 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 SUGCTQ9HAC7 445 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 LMCD1Q9NZU5 365 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.61
CHD4-212ENST00000545083 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.61
CHD4-212ENST00000545083 SCN10AQ9Y5Y9 1956 aa11.21□□□□□ -0.62
CHD4-212ENST00000545083 LCTP09848 1927 aa11.21□□□□□ -0.62
CHD4-212ENST00000545083 MYH4Q9Y623 1939 aa11.21□□□□□ -0.62
CHD4-212ENST00000545083 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 TTLL1O95922 423 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 FDX1P10109 184 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 KCNA5P22460 613 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 NSMFQ6X4W1 530 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 CTAGE1Q96RT6 745 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 MTG1Q9BT17 334 aaPredicted RBP11.2□□□□□ -0.62
CHD4-212ENST00000545083 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 TANC1Q9C0D5 1861 aa11.2□□□□□ -0.62
CHD4-212ENST00000545083 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
CHD4-212ENST00000545083 MCCP23508 829 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 SSTR3P32745 418 aaPredicted RBP11.19□□□□□ -0.62
CHD4-212ENST00000545083 KCNJ6P48051 423 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 CPT1AP50416 773 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 ERVK-21P61565 698 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 KCTD1Q719H9 257 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 SIRT2Q8IXJ6 389 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
CHD4-212ENST00000545083 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 OSBP2Q969R2 916 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 GMCL1Q96IK5 515 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 ZNF318Q5VUA4 2279 aa11.19□□□□□ -0.62
CHD4-212ENST00000545083 PLIN4Q96Q06 1357 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 LINC01553A4QN01 128 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 ALADP13716 330 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 ALDH5A1P51649 535 aaPredicted RBP11.18□□□□□ -0.62
CHD4-212ENST00000545083 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
CHD4-212ENST00000545083 PTCRAQ6ISU1 281 aaPredicted RBP11.18□□□□□ -0.62
CHD4-212ENST00000545083 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 CHURC1Q8WUH1 139 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 COPS5Q92905 334 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 TGS1Q96RS0 853 aaKnown RBP11.18□□□□□ -0.62
CHD4-212ENST00000545083 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
CHD4-212ENST00000545083 PRR12Q9ULL5 1215 aa11.18□□□□□ -0.62
CHD4-212ENST00000545083 MYH7P12883 1935 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 A6NJR5 290 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 NFIBO00712 420 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 DCXO43602 365 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 PLA2G6O60733 806 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 GJB5O95377 273 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 SLC1A4P43007 532 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 BFSP2Q13515 415 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 BAATQ14032 418 aaPredicted RBP11.17□□□□□ -0.62
CHD4-212ENST00000545083 ZSCAN25Q6NSZ9 544 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
CHD4-212ENST00000545083 RAD9AQ99638 391 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 CCPG1Q9ULG6 757 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 TRIOO75962 3097 aa11.17□□□□□ -0.62
CHD4-212ENST00000545083 H3BQ06 376 aaPredicted RBP11.16□□□□□ -0.62
CHD4-212ENST00000545083 M0R2C6 588 aa11.16□□□□□ -0.62
CHD4-212ENST00000545083 GPAA1O43292 621 aa11.16□□□□□ -0.62
CHD4-212ENST00000545083 NBNO60934 754 aa11.16□□□□□ -0.62
CHD4-212ENST00000545083 CXCL10P02778 98 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms