RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 TRIM58Q8NG06 486 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 NUP58Q9BVL2 599 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 EHD4Q9H223 541 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 NFU1Q9UMS0 254 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 KCNK3O14649 394 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 USP14P54578 494 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 TUBB4BP68371 445 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 KLHL30Q0D2K2 578 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 CEP57Q86XR8 500 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 DNAAF5Q86Y56 855 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 FAM84BQ96KN1 310 aaPredicted RBP14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 MINPP1Q9UNW1 487 aa14.67□□□□□ -0.06
PCMTD1-208ENST00000544451 CDHR2Q9BYE9 1310 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 BACH1O14867 736 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 ERLIN2O94905 339 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 EEF1GP26641 437 aaKnown RBP14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 NEK8Q86SG6 692 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 COG1Q8WTW3 980 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 PCDHA13Q9Y5I0 950 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 FAM205AQ6ZU69 1335 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 ZBED6P86452 979 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 UBE2SQ16763 222 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 SLC9C1Q4G0N8 1177 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 CEP85LQ5SZL2 805 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 TPTE2Q6XPS3 522 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 FBXL16Q8N461 479 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 PLA2G12BQ9BX93 195 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 GOLPH3Q9H4A6 298 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 ADAMTS1Q9UHI8 967 aa14.66□□□□□ -0.06
PCMTD1-208ENST00000544451 SLC4A9Q96Q91 983 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 CAPN7Q9Y6W3 813 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 LRRC53A6NM62 1247 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 ADAMTS3O15072 1205 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 CCNE1P24864 410 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 HDAC7Q8WUI4 952 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 NDST4Q9H3R1 872 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 ARPP21Q9UBL0 812 aaPredicted RBP14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 MKRN1Q9UHC7 482 aaKnown RBP14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 E7EVH7 732 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 HEXIM1O94992 359 aaKnown RBP14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 LDHCP07864 332 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 RFC4P35249 363 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 CDKAL1Q5VV42 579 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 MAEAQ7L5Y9 396 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 MARCH10Q8NA82 808 aaPredicted RBP14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 RDH13Q8NBN7 331 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 PPM1EQ8WY54 764 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 TSGA10Q9BZW7 698 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 MYO1AQ9UBC5 1043 aa14.65□□□□□ -0.06
PCMTD1-208ENST00000544451 ABCB4P21439 1286 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 CFAP221Q4G0U5 840 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 VGLL2Q8N8G2 317 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 FAM133AQ8N9E0 248 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 DPH5Q9H2P9 285 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 CHMP2AO43633 222 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 UFL1O94874 794 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 CYP4A11Q02928 519 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 SEC23AQ15436 765 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 ADSSL1Q8N142 457 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 KRT14P02533 472 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 KRT13P13646 458 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 SFMBT2Q5VUG0 894 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 AP1M1Q9BXS5 423 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 DMGDHQ9UI17 866 aaKnown RBP14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 PCDHB13Q9Y5F0 798 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 CNTNAP5Q8WYK1 1306 aa14.64□□□□□ -0.07
PCMTD1-208ENST00000544451 MEIS1O00470 390 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 TCP10Q12799 353 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 USH1GQ495M9 461 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 C3orf67Q6ZVT6 689 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 KRT25Q7Z3Z0 450 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 PKD2L1Q9P0L9 805 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 NFAT5O94916 1531 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 PPFIA1Q13136 1202 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 CCDC25Q86WR0 208 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 SELENOSQ9BQE4 189 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 KCND1Q9NSA2 647 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 CAPN6Q9Y6Q1 641 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 ZNF804BA4D1E1 1349 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 PNPLA7Q6ZV29 1317 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 TRAPPC10P48553 1259 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 HERVK_113P62684 666 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 IFT20Q8IY31 132 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 ATP8A2Q9NTI2 1148 aa14.63□□□□□ -0.07
PCMTD1-208ENST00000544451 ERVV-1B6SEH8 477 aa14.62□□□□□ -0.07
PCMTD1-208ENST00000544451 SEMA3EO15041 775 aa14.62□□□□□ -0.07
PCMTD1-208ENST00000544451 FGFR2P21802 821 aa14.62□□□□□ -0.07
PCMTD1-208ENST00000544451 LARP4BQ92615 738 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms