RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	EVI5	O60447	810 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	PPP1R11	O60927	126 aa	Predicted RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	ALDH5A1	P51649	535 aa	Predicted RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	ATN1	P54259	1190 aa	Predicted RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	PDE4D	Q08499	809 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	SLC35G1	Q2M3R5	365 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	CCDC144B	Q3MJ40	725 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	MAMDC4	Q6UXC1	1216 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	FCHSD1	Q86WN1	690 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	FBXO16	Q8IX29	292 aa	Predicted RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	SRBD1	Q8N5C6	995 aa	Known RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	ANKLE1	Q8NAG6	615 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	VTI1A	Q96AJ9	217 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	TAAR1	Q96RJ0	339 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	MPHOSPH6	Q99547	160 aa	Known RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	LARP6	Q9BRS8	491 aa	Known RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	RIOX1	Q9H6W3	641 aa		12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.8	□□□□□ -0.36
DDB1-222	ENST00000543627	IGHA2	P01877	340 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	RPS6KB1	P23443	525 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	HOXA13	P31271	388 aa	Predicted RBP	12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	ADCYAP1R1	P41586	468 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	RTN1	Q16799	776 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	ARHGEF16	Q5VV41	709 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	APOA5	Q6Q788	366 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	LZTS2	Q9BRK4	669 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	UPF3B	Q9BZI7	483 aa	Known RBP	12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	PDGFC	Q9NRA1	345 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	NRBP1	Q9UHY1	535 aa		12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	TNRC18	O15417	2968 aa	Predicted RBP	12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.79	□□□□□ -0.36
DDB1-222	ENST00000543627	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627		B4DLN1	442 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	DYNC1LI2	O43237	492 aa	Predicted RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	PPFIA3	O75145	1194 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	C6orf222	P0C671	652 aa	Predicted RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	MYCL	P12524	364 aa	Predicted RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	CAPN2	P17655	700 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	EIF2AK2	P19525	551 aa	Known RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	MRPL12	P52815	198 aa	Known RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	TNFAIP2	Q03169	654 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	TRAF1	Q13077	416 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	LRRC41	Q15345	812 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	RNF180	Q86T96	592 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	C7orf61	Q8IZ16	206 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	KCNB2	Q92953	911 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	RMDN3	Q96TC7	470 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	MAP3K14	Q99558	947 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	SPC25	Q9HBM1	224 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	CYP46A1	Q9Y6A2	500 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	ASTN1	O14525	1302 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	MYH6	P13533	1939 aa		12.78	□□□□□ -0.36
DDB1-222	ENST00000543627	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	DNM1L	O00429	736 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	POLR2M	P0CAP2	368 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	PTGS1	P23219	599 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	MNX1	P50219	401 aa	Predicted RBP	12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	METAP2	P50579	478 aa	Known RBP eCLIP	12.77	□□□□□ -0.37	1e-6	■■■■■ 26.8
DDB1-222	ENST00000543627	CCT2	P78371	535 aa	Known RBP	12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	IRX5	P78411	483 aa	Predicted RBP	12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	SEPT14	Q6ZU15	432 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	TMTC3	Q6ZXV5	915 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	RUFY3	Q7L099	469 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	HEATR3	Q7Z4Q2	680 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	UBE2Q1	Q7Z7E8	422 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	SGMS1	Q86VZ5	419 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	MTMR8	Q96EF0	704 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	ZFP91	Q96JP5	570 aa	Predicted RBP	12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	AP5M1	Q9H0R1	490 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	RBM28	Q9NW13	759 aa	Known RBP	12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	COL20A1	Q9P218	1284 aa		12.77	□□□□□ -0.37
DDB1-222	ENST00000543627	MCM3AP	O60318	1980 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	DUSP11	O75319	330 aa	Known RBP	12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	SEC24B	O95487	1268 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	ADD1	P35611	737 aa	Known RBP	12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	BEX3	Q00994	111 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	STK3	Q13188	491 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	GNAS	Q5JWF2	1037 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	TMEM63B	Q5T3F8	832 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	RGS22	Q8NE09	1264 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	DNER	Q8NFT8	737 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	SMARCC2	Q8TAQ2	1214 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	NSUN6	Q8TEA1	469 aa	Known RBP	12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	CUL5	Q93034	780 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	SPZ1	Q9BXG8	430 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	WDR11	Q9BZH6	1224 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	PDRG1	Q9NUG6	133 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	ATP11B	Q9Y2G3	1177 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	NR2E3	Q9Y5X4	410 aa		12.76	□□□□□ -0.37
DDB1-222	ENST00000543627		V9GY48	417 aa	Predicted RBP	12.76	□□□□□ -0.37
DDB1-222	ENST00000543627	MYADML2	A6NDP7	307 aa		12.75	□□□□□ -0.37
DDB1-222	ENST00000543627		H0YGN5	161 aa		12.75	□□□□□ -0.37
DDB1-222	ENST00000543627	ADCY6	O43306	1168 aa		12.75	□□□□□ -0.37
DDB1-222	ENST00000543627	SORBS3	O60504	671 aa		12.75	□□□□□ -0.37
DDB1-222	ENST00000543627	SMPD1	P17405	629 aa		12.75	□□□□□ -0.37
DDB1-222	ENST00000543627	SYN1	P17600	705 aa		12.75	□□□□□ -0.37

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