RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 TLE2Q04725 743 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 TROAPQ12815 778 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 GRM4Q14833 912 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 NECTIN1Q15223 517 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 GNASQ5JWF2 1037 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 PCSK9Q8NBP7 692 aaKnown RBP16.64■□□□□ 0.25
VPS37B-204ENST00000543590 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 TBC1D5Q92609 795 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 MAF1Q9H063 256 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
VPS37B-204ENST00000543590 ASGR1P07306 291 aa16.63■□□□□ 0.25
VPS37B-204ENST00000543590 MDM2Q00987 491 aaPredicted RBP16.63■□□□□ 0.25
VPS37B-204ENST00000543590 CATIPQ7Z7H3 387 aa16.63■□□□□ 0.25
VPS37B-204ENST00000543590 DNERQ8NFT8 737 aa16.63■□□□□ 0.25
VPS37B-204ENST00000543590 MTMR8Q96EF0 704 aa16.63■□□□□ 0.25
VPS37B-204ENST00000543590 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
VPS37B-204ENST00000543590 STARD7Q9NQZ5 370 aa16.63■□□□□ 0.25
VPS37B-204ENST00000543590 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
VPS37B-204ENST00000543590 PRC1O43663 620 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 PTGS1P23219 599 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 BEX3Q00994 111 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 PDE4DQ08499 809 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 TMEM63BQ5T3F8 832 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 TLK2Q86UE8 772 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 MCF2L2Q86YR7 1114 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 GLT1D1Q96MS3 346 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 LBHD1Q9BQE6 289 aaPredicted RBP16.62■□□□□ 0.25
VPS37B-204ENST00000543590 MTA3Q9BTC8 594 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 AP5M1Q9H0R1 490 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 LY9Q9HBG7 655 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
VPS37B-204ENST00000543590 PDLIM7Q9NR12 457 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 ELP1O95163 1332 aa16.62■□□□□ 0.25
VPS37B-204ENST00000543590 MYH6P13533 1939 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 ZBTB5O15062 677 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 DYNC1LI2O43237 492 aaPredicted RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 PPP1R11O60927 126 aaPredicted RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 CDC45O75419 566 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 EDNRBP24530 442 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 MCM5P33992 734 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 COL9A3Q14050 684 aaPredicted RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 MPHOSPH6Q99547 160 aaKnown RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 PRDM5Q9NQX1 630 aaPredicted RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 Q9Y3F1 56 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 B4DLN1 442 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 NEFLP07196 543 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 FSCN1Q16658 493 aaKnown RBP16.61■□□□□ 0.25
VPS37B-204ENST00000543590 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
VPS37B-204ENST00000543590 TRIM43BA6NCK2 446 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 OPLAHO14841 1288 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 CYTH3O43739 400 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 PQBP1O60828 265 aaKnown RBP16.6■□□□□ 0.25
VPS37B-204ENST00000543590 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 RNF20Q5VTR2 975 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 ANKRD33Q7Z3H0 272 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 TDHQ8IZJ6 230 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 TMTC2Q8N394 836 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 TRIM43Q96BQ3 446 aaPredicted RBP16.6■□□□□ 0.25
VPS37B-204ENST00000543590 TMEM87BQ96K49 555 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 TOX2Q96NM4 488 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 PIGSQ96S52 555 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
VPS37B-204ENST00000543590 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
VPS37B-204ENST00000543590 DDAH1O94760 285 aa16.59■□□□□ 0.25
VPS37B-204ENST00000543590 CFBP00751 764 aa16.59■□□□□ 0.25
VPS37B-204ENST00000543590 CLTBP09497 229 aa16.59■□□□□ 0.25
VPS37B-204ENST00000543590 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
VPS37B-204ENST00000543590 NSUN6Q8TEA1 469 aaKnown RBP16.59■□□□□ 0.25
VPS37B-204ENST00000543590 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
VPS37B-204ENST00000543590 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
VPS37B-204ENST00000543590 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.24
VPS37B-204ENST00000543590 PNMA6FA0A0J9YX94 578 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
VPS37B-204ENST00000543590 DCDC2CA8MYV0 355 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 SOX1O00570 391 aaPredicted RBP16.58■□□□□ 0.24
VPS37B-204ENST00000543590 CDK7P50613 346 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 HSD17B4P51659 736 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 FAAP100Q0VG06 881 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 TRAF1Q13077 416 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 CTCFLQ8NI51 663 aaPredicted RBP16.58■□□□□ 0.24
VPS37B-204ENST00000543590 SCFD2Q8WU76 684 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 BADQ92934 168 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 LTBP2Q14767 1821 aa16.58■□□□□ 0.24
VPS37B-204ENST00000543590 RANBP2P49792 3224 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms