RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TDHQ8IZJ6 230 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TOX2Q96NM4 488 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 VTA1Q9NP79 307 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ADD3Q9UEY8 706 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ELP1O95163 1332 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 BAZ2BQ9UIF8 2168 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CDH23Q9H251 3354 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CALML3P27482 149 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 BEX3Q00994 111 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TROAPQ12815 778 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TRDNQ13061 729 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 USH1GQ495M9 461 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GNASQ5JWF2 1037 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 EEPD1Q7L9B9 569 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PCSK9Q8NBP7 692 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 IGDCC4Q8TDY8 1250 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 NUP133Q8WUM0 1156 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MAF1Q9H063 256 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 STARD7Q9NQZ5 370 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 Q9Y3F1 56 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MYH6P13533 1939 aa15.31■□□□□ 0.04
TNFRSF1A-215ENST00000543359 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 FAAP100Q0VG06 881 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GRM4Q14833 912 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 DUSP28Q4G0W2 176 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CHST3Q7LGC8 479 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 NCOA7Q8NI08 942 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GRIN2DO15399 1336 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ABCB11O95342 1321 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 KLRF2D3W0D1 207 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 OPLAHO14841 1288 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 DYNC1LI2O43237 492 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CYTH3O43739 400 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CLTBP09497 229 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 NECTIN1Q15223 517 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TLK2Q86UE8 772 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 SLC43A3Q8NBI5 491 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 SYTL5Q8TDW5 730 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 BADQ92934 168 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GLT1D1Q96MS3 346 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 LBHD1Q9BQE6 289 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 RIOX1Q9H6W3 641 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PRDM5Q9NQX1 630 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PRKAG2Q9UGJ0 569 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CHD9Q3L8U1 2897 aa15.29■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ARVCFO00192 962 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 SLC27A2O14975 620 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GHRHRQ02643 423 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 NOL8Q76FK4 1167 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 FBXO11Q86XK2 927 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 WDR11Q9BZH6 1224 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TBX21Q9UL17 535 aa15.28■□□□□ 0.04
TNFRSF1A-215ENST00000543359 WTAPQ15007 396 aa15.27■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.04
TNFRSF1A-215ENST00000543359 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CXCL17Q6UXB2 119 aa15.27■□□□□ 0.04
TNFRSF1A-215ENST00000543359 LY9Q9HBG7 655 aa15.27■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MRPL11Q9Y3B7 192 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-215ENST00000543359 A0A0U1RQG5 324 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ZBTB5O15062 677 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CD4P01730 458 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 HSD17B4P51659 736 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 EPHB4P54760 987 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 C9orf50Q5SZB4 431 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CREB3L3Q68CJ9 461 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CCDC62Q6P9F0 684 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 FAM126BQ8IXS8 530 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MTA3Q9BTC8 594 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 AMNQ9BXJ7 453 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 AP5M1Q9H0R1 490 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TMEM39AQ9NV64 488 aa15.26■□□□□ 0.03
TNFRSF1A-215ENST00000543359 DCDC2CA8MYV0 355 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 DHX16O60231 1041 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CABYRO75952 493 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ARIH2O95376 493 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PDE4DQ08499 809 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SHHQ15465 462 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PIGSQ96S52 555 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MAP3K14Q99558 947 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PCDHA1Q9Y5I3 950 aa15.25■□□□□ 0.03
TNFRSF1A-215ENST00000543359 EYSQ5T1H1 3165 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MROH7Q68CQ1 1323 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ERICH2A1L162 156 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms