RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 SOX10P56693 466 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 ERVK-9P63128 1117 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 ERVK-24P63145 666 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 CCNA1P78396 465 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 PLS1Q14651 629 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 TAF1CQ15572 869 aaPredicted RBP18.36■□□□□ 0.53
TRIM65-204ENST00000543309 FERMT3Q86UX7 667 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 SHCBP1Q8NEM2 672 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 CLEC4DQ8WXI8 215 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 PAGR1Q9BTK6 254 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 TXNRD2Q9NNW7 524 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 RNF146Q9NTX7 359 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 MYH15Q9Y2K3 1946 aa18.36■□□□□ 0.53
TRIM65-204ENST00000543309 MEIS2O14770 477 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 HSD17B4P51659 736 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 NR5A1Q13285 461 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 AP3B2Q13367 1082 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 FAM110CQ1W6H9 321 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 KRT25Q7Z3Z0 450 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 GPRC5AQ8NFJ5 357 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 MOV10L1Q9BXT6 1211 aaKnown RBP18.35■□□□□ 0.53
TRIM65-204ENST00000543309 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 PCDHA6Q9UN73 950 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 RIPK3Q9Y572 518 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 PCDHA8Q9Y5H6 950 aa18.35■□□□□ 0.53
TRIM65-204ENST00000543309 GCOM1H8Y6P7 765 aaPredicted RBP18.34■□□□□ 0.53
TRIM65-204ENST00000543309 FOSP01100 380 aaPredicted RBP18.34■□□□□ 0.53
TRIM65-204ENST00000543309 POLR2MP0CAP2 368 aa18.34■□□□□ 0.53
TRIM65-204ENST00000543309 ATL3Q6DD88 541 aa18.34■□□□□ 0.53
TRIM65-204ENST00000543309 MROH8Q9H579 483 aa18.34■□□□□ 0.53
TRIM65-204ENST00000543309 ZFYVE28Q9HCC9 887 aa18.34■□□□□ 0.53
TRIM65-204ENST00000543309 HOMER2Q9NSB8 354 aa18.34■□□□□ 0.53
TRIM65-204ENST00000543309 CCDC194A0A1B0GVG4 234 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 NFIBO00712 420 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 TLR2O60603 784 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 TAL1P17542 331 aaPredicted RBP18.33■□□□□ 0.52
TRIM65-204ENST00000543309 TRAPPC10P48553 1259 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 NOM1Q5C9Z4 860 aaKnown RBP18.33■□□□□ 0.52
TRIM65-204ENST00000543309 RILPL1Q5EBL4 403 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.52
TRIM65-204ENST00000543309 CLEC17AQ6ZS10 378 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 ZNF296Q8WUU4 475 aaPredicted RBP18.33■□□□□ 0.52
TRIM65-204ENST00000543309 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.52
TRIM65-204ENST00000543309 TNPO1Q92973 898 aaKnown RBP18.33■□□□□ 0.52
TRIM65-204ENST00000543309 CFHR5Q9BXR6 569 aa18.33■□□□□ 0.52
TRIM65-204ENST00000543309 PFASO15067 1338 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 ADAMTS3O15072 1205 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 TBC1D8O95759 1140 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 CFBP00751 764 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 BCRP11274 1271 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 NONOQ15233 471 aaKnown RBP eCLIP18.32■□□□□ 0.522e-8■■■■□ 21
TRIM65-204ENST00000543309 PKN2Q16513 984 aaKnown RBP18.32■□□□□ 0.52
TRIM65-204ENST00000543309 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 ANKRD13CQ8N6S4 541 aa18.32■□□□□ 0.52
TRIM65-204ENST00000543309 BIN2Q9UBW5 565 aaPredicted RBP18.32■□□□□ 0.52
TRIM65-204ENST00000543309 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 ERCC3P19447 782 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 UBE2SQ16763 222 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 Q3C1V9 767 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 C17orf99Q6UX52 265 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 NCAPG2Q86XI2 1143 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 RASGRP4Q8TDF6 673 aa18.31■□□□□ 0.52
TRIM65-204ENST00000543309 ZNF396Q96N95 335 aaPredicted RBP18.31■□□□□ 0.52
TRIM65-204ENST00000543309 NOL7Q9UMY1 257 aaKnown RBP18.31■□□□□ 0.52
TRIM65-204ENST00000543309 PEX10O60683 326 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 RPS6P62753 249 aaKnown RBP18.3■□□□□ 0.52
TRIM65-204ENST00000543309 CRHR2Q13324 411 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 PIK3AP1Q6ZUJ8 805 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 ANO3Q9BYT9 981 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 EHMT1Q9H9B1 1298 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 A1CFQ9NQ94 594 aaKnown RBP18.3■□□□□ 0.52
TRIM65-204ENST00000543309 TMEM260Q9NX78 707 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 HTTP42858 3142 aa18.3■□□□□ 0.52
TRIM65-204ENST00000543309 FRMPD4Q14CM0 1322 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 GPR25O00155 361 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 MAPK4P31152 587 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 HOXA13P31271 388 aaPredicted RBP18.29■□□□□ 0.52
TRIM65-204ENST00000543309 EARS2Q5JPH6 523 aaKnown RBP18.29■□□□□ 0.52
TRIM65-204ENST00000543309 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 ABRAQ8N0Z2 381 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 SYTL5Q8TDW5 730 aaPredicted RBP18.29■□□□□ 0.52
TRIM65-204ENST00000543309 TBC1D5Q92609 795 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
TRIM65-204ENST00000543309 RPTORQ8N122 1335 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 STRNO43815 780 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 SREBF1P36956 1147 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 KRT85P78386 507 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 ORC2Q13416 577 aaPredicted RBP18.28■□□□□ 0.52
TRIM65-204ENST00000543309 ANKRD35Q8N283 1001 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 TBCKQ8TEA7 893 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 CRYGNQ8WXF5 182 aa18.28■□□□□ 0.52
TRIM65-204ENST00000543309 NAP1L4Q99733 375 aaKnown RBP18.28■□□□□ 0.52
TRIM65-204ENST00000543309 PORCNQ9H237 461 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms