RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 OR14I1A6ND48 311 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 MEFVO15553 781 aaPredicted RBP6.1□□□□□ -1.43
MDM2-229ENST00000543046 NPHS1O60500 1241 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 SDHBP21912 280 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 SSRP1Q08945 709 aaKnown RBP6.1□□□□□ -1.43
MDM2-229ENST00000543046 MAP4K2Q12851 820 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 E4F1Q66K89 784 aaPredicted RBP6.1□□□□□ -1.43
MDM2-229ENST00000543046 MBLAC2Q68D91 279 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 KCTD13Q8WZ19 329 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 C1orf159Q96HA4 380 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 TNFRSF12AQ9NP84 129 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 PDLIM7Q9NR12 457 aa6.1□□□□□ -1.43
MDM2-229ENST00000543046 TMEFF2Q9UIK5 374 aaPredicted RBP6.1□□□□□ -1.43
MDM2-229ENST00000543046 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 A0A1W2PQJ5 194 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 DLX3O60479 287 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 DIAPH1O60610 1272 aaKnown RBP6.09□□□□□ -1.43
MDM2-229ENST00000543046 FARP2O94887 1054 aaPredicted RBP6.09□□□□□ -1.43
MDM2-229ENST00000543046 FGFR1P11362 822 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 TACR1P25103 407 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 TXKP42681 527 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 MESP2Q0VG99 397 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 INF2Q27J81 1249 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 SLC35F1Q5T1Q4 408 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 ACBD5Q5T8D3 534 aaPredicted RBP6.09□□□□□ -1.43
MDM2-229ENST00000543046 IQCEQ6IPM2 695 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 DENND5AQ6IQ26 1287 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 ZNF605Q86T29 641 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 CCDC103Q8IW40 242 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 PPIL6Q8IXY8 311 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 POU5F2Q8N7G0 328 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 DIO2Q92813 273 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 ZNF552Q9H707 407 aaPredicted RBP6.09□□□□□ -1.43
MDM2-229ENST00000543046 KCNK12Q9HB15 430 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 GULP1Q9UBP9 304 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 RWDD3Q9Y3V2 267 aa6.09□□□□□ -1.43
MDM2-229ENST00000543046 KDM2BQ8NHM5 1336 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 ARNTLO00327 626 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 PRODHO43272 600 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 ADCY3O60266 1144 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 PPP1R11O60927 126 aaPredicted RBP6.08□□□□□ -1.44
MDM2-229ENST00000543046 MPOP05164 745 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
MDM2-229ENST00000543046 KCNAB2Q13303 367 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 TESK1Q15569 626 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 YOD1Q5VVQ6 348 aaPredicted RBP6.08□□□□□ -1.44
MDM2-229ENST00000543046 BICRALQ6AI39 1079 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 FBXO15Q8NCQ5 510 aaPredicted RBP6.08□□□□□ -1.44
MDM2-229ENST00000543046 DNAJC7Q99615 494 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 LNPKQ9C0E8 428 aa6.08□□□□□ -1.44
MDM2-229ENST00000543046 CDK11AQ9UQ88 783 aaPredicted RBP6.08□□□□□ -1.44
MDM2-229ENST00000543046 NUDT19A8MXV4 375 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 DBHP09172 617 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 LTBRP36941 435 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
MDM2-229ENST00000543046 RAB3GAP1Q15042 981 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 NFE2L2Q16236 605 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
MDM2-229ENST00000543046 NSMFQ6X4W1 530 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 LZTR1Q8N653 840 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 ZBTB38Q8NAP3 1195 aaPredicted RBP6.07□□□□□ -1.44
MDM2-229ENST00000543046 OSBP2Q969R2 916 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 FAM84AQ96KN4 292 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 MTA3Q9BTC8 594 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 KLHL14Q9P2G3 628 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 FBLN5Q9UBX5 448 aa6.07□□□□□ -1.44
MDM2-229ENST00000543046 MYOCOSA0A1B0GUC4 107 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 SRGAP3O43295 1099 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 PEX10O60683 326 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 YBX1P67809 324 aaKnown RBP6.06□□□□□ -1.44
MDM2-229ENST00000543046 RBM10P98175 930 aaKnown RBP6.06□□□□□ -1.44
MDM2-229ENST00000543046 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 RPTNQ6XPR3 784 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 SYDE1Q6ZW31 735 aaPredicted RBP6.06□□□□□ -1.44
MDM2-229ENST00000543046 USP53Q70EK8 1073 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 CABP7Q86V35 215 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 RCBTB1Q8NDN9 531 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 DPF3Q92784 378 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 SLC26A8Q96RN1 970 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 MCOLN1Q9GZU1 580 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 ZSWIM4Q9H7M6 989 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 BTG4Q9NY30 223 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.06□□□□□ -1.44
MDM2-229ENST00000543046 MARCH2Q9P0N8 246 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 TIMM13Q9Y5L4 95 aaPredicted RBP6.06□□□□□ -1.44
MDM2-229ENST00000543046 NPFFR2Q9Y5X5 522 aa6.06□□□□□ -1.44
MDM2-229ENST00000543046 HRKO00198 91 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 ABLIM1O14639 778 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 MYO1BO43795 1136 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 FUCA1P04066 466 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 CYBBP04839 570 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 FAM153BP0C7A2 387 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 GLI4P10075 376 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 LCP1P13796 627 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 VIPR1P32241 457 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 GTF2A2P52657 109 aa6.05□□□□□ -1.44
MDM2-229ENST00000543046 RPL11P62913 178 aaKnown RBP6.05□□□□□ -1.44
MDM2-229ENST00000543046 SRSF3P84103 164 aaKnown RBP6.05□□□□□ -1.44
MDM2-229ENST00000543046 TMEM62Q0P6H9 643 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms