RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ZNF543Q08ER8 600 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 BMS1Q14692 1282 aaKnown RBP7.34□□□□□ -1.24
PTPRO-208ENST00000542557 CNNM4Q6P4Q7 775 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 RETREG2Q8NC44 543 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 RABGGTAQ92696 567 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 P2RX5Q93086 422 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 SERPINB13Q9UIV8 391 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 MAPK8IP1Q9UQF2 711 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 COL11A2P13942 1736 aaPredicted RBP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 COBLO75128 1261 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 ZRANB2O95218 330 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 SRGNP10124 158 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 AKR1B1P15121 316 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 TUBB4BP68371 445 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 PDE4DQ08499 809 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 TMEM266Q2M3C6 531 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 FOXR2Q6PJQ5 311 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 HHIPL2Q6UWX4 724 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 HS6ST3Q8IZP7 471 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 GOLGA1Q92805 767 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 IQCDQ96DY2 449 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 DUSP9Q99956 384 aaKnown RBP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 RAB34Q9BZG1 259 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 EHD4Q9H223 541 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 LZTFL1Q9NQ48 299 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 CAPN11Q9UMQ6 739 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 ABCB11O95342 1321 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 PNMA6FA0A0J9YX94 578 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 PVALEFA0A1B0GWK0 134 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 TECP42680 631 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 ASIC1P78348 528 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 PDIA5Q14554 519 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 CALCRLQ16602 461 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 MEA1Q16626 185 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 FIGNQ5HY92 759 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 GPATCH4Q5T3I0 446 aaKnown RBP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 JAKMIP3Q5VZ66 844 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 PPP4R3AQ6IN85 833 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 TMCO3Q6UWJ1 677 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 LRRC47Q8N1G4 583 aaKnown RBP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 CERS5Q8N5B7 392 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 CSGALNACT2Q8N6G5 542 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 CEP112Q8N8E3 955 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 OR8K1Q8NGG5 319 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 NUP58Q9BVL2 599 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 TTYH3Q9C0H2 523 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 UBA5Q9GZZ9 404 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 RIC8AQ9NPQ8 531 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 DDX4Q9NQI0 724 aaKnown RBP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 BIN2Q9UBW5 565 aaPredicted RBP7.33□□□□□ -1.24
PTPRO-208ENST00000542557 CDC23Q9UJX2 597 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 ADAMTSL1Q8N6G6 1762 aa7.33□□□□□ -1.24
PTPRO-208ENST00000542557 BRWD3Q6RI45 1802 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 FRMPD2Q68DX3 1309 aaPredicted RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 TTC26A0AVF1 554 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 NPR1P16066 1061 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 SHMT1P34896 483 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 ARHGAP25P42331 645 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 CLK2P49760 499 aaKnown RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 GRB10Q13322 594 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 PICALMQ13492 652 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 DPP8Q6V1X1 898 aaPredicted RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 UNC13DQ70J99 1090 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 SRGAP1Q7Z6B7 1085 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 ZSCAN29Q8IWY8 852 aaPredicted RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 ACRBPQ8NEB7 543 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 MTMR8Q96EF0 704 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 PLIN2Q99541 437 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 NAP1L4Q99733 375 aaKnown RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 ZC3H12CQ9C0D7 883 aaKnown RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 LRRC27Q9C0I9 530 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 VAT1LQ9HCJ6 419 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 BLOC1S4Q9NUP1 217 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 TMEM260Q9NX78 707 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 LUC7L2Q9Y383 392 aaKnown RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 FHOD1Q9Y613 1164 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 MYH4Q9Y623 1939 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 SIPA1L1O43166 1804 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 CTAGE9A4FU28 777 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 SLC26A4O43511 780 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 EDIL3O43854 480 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 NDUFA10O95299 355 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 HLA-DOAP06340 250 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 GCFC2P16383 781 aaKnown RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 FAM193AP78312 1265 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 STK4Q13043 487 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 TMEM119Q4V9L6 283 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 CENPPQ6IPU0 288 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 SV2BQ7L1I2 683 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 KIAA0895Q8NCT3 520 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 CNOT6LQ96LI5 555 aaKnown RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 PNMA5Q96PV4 448 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 TUBGCP2Q9BSJ2 902 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 IRX2Q9BZI1 471 aaPredicted RBP7.32□□□□□ -1.24
PTPRO-208ENST00000542557 GLT8D2Q9H1C3 349 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 JMJD4Q9H9V9 463 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 LRWD1Q9UFC0 647 aa7.32□□□□□ -1.24
PTPRO-208ENST00000542557 ZNF646O15015 1829 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms