RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 SCLYQ96I15 445 aa10.59□□□□□ -0.71
UBC-211ENST00000542416 WDR11Q9BZH6 1224 aa10.59□□□□□ -0.71
UBC-211ENST00000542416 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
UBC-211ENST00000542416 MTCH2Q9Y6C9 303 aa10.59□□□□□ -0.71
UBC-211ENST00000542416 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
UBC-211ENST00000542416 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 BAIAP3O94812 1187 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 MYOGP15173 224 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 PURAQ00577 322 aaKnown RBP10.58□□□□□ -0.72
UBC-211ENST00000542416 TFF2Q03403 129 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 PPARAQ07869 468 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 TTLL4Q14679 1199 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 KCTD1Q719H9 257 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 DEFB128Q7Z7B8 93 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 CCDC155Q8N6L0 562 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 DCAF4Q8WV16 495 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 HLA-CQ95604 372 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
UBC-211ENST00000542416 LMCD1Q9NZU5 365 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 RAPGEFL1Q9UHV5 662 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 PRR12Q9ULL5 1215 aa10.58□□□□□ -0.72
UBC-211ENST00000542416 PARP14Q460N5 1801 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 RBM47A0AV96 593 aaKnown RBP10.57□□□□□ -0.72
UBC-211ENST00000542416 PARNO95453 639 aaKnown RBP10.57□□□□□ -0.72
UBC-211ENST00000542416 MYL3P08590 195 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 CYP2C9P11712 490 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 KCNJ6P48051 423 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 ALDH5A1P51649 535 aaPredicted RBP10.57□□□□□ -0.72
UBC-211ENST00000542416 BAATQ14032 418 aaPredicted RBP10.57□□□□□ -0.72
UBC-211ENST00000542416 PPP2R5BQ15173 497 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 MUM1L1Q5H9M0 696 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 TMEM31Q5JXX7 168 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 OR6J1Q8NGC5 347 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 SCFD2Q8WU76 684 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 FTOQ9C0B1 505 aaKnown RBP eCLIP10.57□□□□□ -0.72
UBC-211ENST00000542416 NOD1Q9Y239 953 aa10.57□□□□□ -0.72
UBC-211ENST00000542416 COL11A1P12107 1806 aaPredicted RBP10.56□□□□□ -0.72
UBC-211ENST00000542416 PLXNA1Q9UIW2 1896 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 PTPDC1A2A3K4 754 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 M0R2C6 588 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 SMARCA5O60264 1052 aaPredicted RBP10.56□□□□□ -0.72
UBC-211ENST00000542416 IQCF3P0C7M6 154 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
UBC-211ENST00000542416 KCNQ1P51787 676 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 PDE4DQ08499 809 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 CCDC96Q2M329 555 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 NBPF20Q3BBV1 942 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 BTNL9Q6UXG8 535 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 HERC6Q8IVU3 1022 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 DNERQ8NFT8 737 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 CAGE1Q8TC20 777 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 ARNTL2Q8WYA1 636 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 VWCEQ96DN2 955 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 NECAB3Q96P71 396 aaPredicted RBP10.56□□□□□ -0.72
UBC-211ENST00000542416 MAF1Q9H063 256 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 RANBP17Q9H2T7 1088 aaKnown RBP10.56□□□□□ -0.72
UBC-211ENST00000542416 DCTPP1Q9H773 170 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 TTC41PQ6P2S7 1318 aa10.56□□□□□ -0.72
UBC-211ENST00000542416 BAZ2AQ9UIF9 1905 aaKnown RBP10.55□□□□□ -0.72
UBC-211ENST00000542416 A6NJR5 290 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 TLL1O43897 1013 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 EFCAB14O75071 495 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 NOVP48745 357 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 TAP1Q03518 808 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 AFAP1L1Q8TED9 768 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 LRFN3Q9BTN0 628 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 FSD1Q9BTV5 496 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBC-211ENST00000542416 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
UBC-211ENST00000542416 MYH8P13535 1937 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
UBC-211ENST00000542416 RFXAPO00287 272 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 ORC4O43929 436 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 RANBP6O60518 1105 aaKnown RBP10.54□□□□□ -0.72
UBC-211ENST00000542416 GPR37L1O60883 481 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 TOP1P11387 765 aaKnown RBP10.54□□□□□ -0.72
UBC-211ENST00000542416 SNAP25P60880 206 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 ZMYM1Q5SVZ6 1142 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 RNF207Q6ZRF8 634 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 ZBED2Q9BTP6 218 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 CERS4Q9HA82 394 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 IL17RBQ9NRM6 502 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 ANAPC4Q9UJX5 808 aa10.54□□□□□ -0.72
UBC-211ENST00000542416 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 NFIBO00712 420 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 TXNP10599 105 aaKnown RBP10.53□□□□□ -0.72
UBC-211ENST00000542416 PTGS1P23219 599 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 EDNRBP24530 442 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 CALML3P27482 149 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 GRB10Q13322 594 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 PTGISQ16647 500 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 TMEM63BQ5T3F8 832 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 SESTD1Q86VW0 696 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
UBC-211ENST00000542416 EPHX3Q9H6B9 360 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 TCP11L1Q9NUJ3 509 aa10.53□□□□□ -0.72
UBC-211ENST00000542416 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms