RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 RTN1Q16799 776 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 C8orf34Q49A92 452 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 ARMCX2Q7L311 632 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 MICU3Q86XE3 530 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 CCDC144CPQ8IYA2 1237 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 ZNF274Q96GC6 653 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 SEC63Q9UGP8 760 aaKnown RBP15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 MYH6P13533 1939 aa15.94■□□□□ 0.14
TNFSF13B-206ENST00000542136 CENPFP49454 3210 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 CNGA1P29973 690 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 ACVR2BQ13705 512 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 ARRDC4Q8NCT1 418 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 IWS1Q96ST2 819 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 FAM217BQ9NTX9 383 aaPredicted RBP15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 FAM184BQ9ULE4 1060 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 ASTN1O14525 1302 aa15.93■□□□□ 0.14
TNFSF13B-206ENST00000542136 GOLGA8AA7E2F4 631 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 GOLGA8BA8MQT2 603 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 hCG_1984214I3L0E3 225 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 OPLAHO14841 1288 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 SEC24BO95487 1268 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 AKR1A1P14550 325 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 EDNRBP24530 442 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 METAP2P50579 478 aaKnown RBP eCLIP15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 ALDH5A1P51649 535 aaPredicted RBP15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 TOB2Q14106 344 aaPredicted RBP15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 PRAMEF19Q5SWL8 479 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 HOMER1Q86YM7 354 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 ZNF713Q8N859 430 aaPredicted RBP15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 NSUN6Q8TEA1 469 aaKnown RBP15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 KATNBL1Q9H079 304 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 VTA1Q9NP79 307 aa15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
TNFSF13B-206ENST00000542136 PIK3CDO00329 1044 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 RXRAP19793 462 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 CALML3P27482 149 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 PDIA3P30101 505 aaKnown RBP15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 NKX3-2P78367 333 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 ANKRD1Q15327 319 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 IQSEC1Q6DN90 963 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 SLC30A10Q6XR72 485 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 SYTL5Q8TDW5 730 aaPredicted RBP15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 PDRG1Q9NUG6 133 aa15.91■□□□□ 0.14
TNFSF13B-206ENST00000542136 GCOM1H8Y6P7 765 aaPredicted RBP15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 DUSP11O75319 330 aaKnown RBP15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 FARP2O94887 1054 aaPredicted RBP15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 POLR2MP0CAP2 368 aa15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 RARBP10826 455 aa15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 TBC1D5Q92609 795 aa15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 UPF3BQ9BZI7 483 aaKnown RBP15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 Q9Y3F1 56 aa15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 BAZ2BQ9UIF8 2168 aaKnown RBP15.9■□□□□ 0.14
TNFSF13B-206ENST00000542136 RBM47A0AV96 593 aaKnown RBP15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 DNM1LO00429 736 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 CFBP00751 764 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 CDC27P30260 824 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 ADD1P35611 737 aaKnown RBP15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 CCDC144BQ3MJ40 725 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 NECAB2Q7Z6G3 386 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 CMTR1Q8N1G2 835 aaKnown RBP15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 RMDN3Q96TC7 470 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 GLT8D2Q9H1C3 349 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 V9GY48 417 aaPredicted RBP15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 LCTP09848 1927 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 CNTNAP5Q8WYK1 1306 aa15.89■□□□□ 0.13
TNFSF13B-206ENST00000542136 PRPF3O43395 683 aaKnown RBP15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 COL6A1P12109 1028 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 IFNAR1P17181 557 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 PDE4DQ08499 809 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 NTRK3Q16288 839 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 TAPT1Q6NXT6 567 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 PURBQ96QR8 312 aaKnown RBP15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 TAAR1Q96RJ0 339 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 HTATIP2Q9BUP3 242 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 XPNPEP3Q9NQH7 507 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 COL20A1Q9P218 1284 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 GTF3C3Q9Y5Q9 886 aa15.88■□□□□ 0.13
TNFSF13B-206ENST00000542136 EIF3JO75822 258 aaKnown RBP15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 CST5P28325 142 aaPredicted RBP15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 TNFAIP2Q03169 654 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 STXBP2Q15833 593 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 ARHGEF16Q5VV41 709 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 RNF180Q86T96 592 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 RAB11FIP4Q86YS3 637 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 CUL5Q93034 780 aa15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 PAWRQ96IZ0 340 aaKnown RBP15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
TNFSF13B-206ENST00000542136 UPF3AQ9H1J1 476 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms