RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 NFRKBQ6P4R8 1299 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 LRRC1Q9BTT6 524 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 GOLGA6AQ9NYA3 693 aa17.08■□□□□ 0.32
CNOT9-208ENST00000542068 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.32
CNOT9-208ENST00000542068 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
CNOT9-208ENST00000542068 BUB1O43683 1085 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 BTDP43251 543 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 LIG3P49916 1009 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 SECISBP2LQ93073 1101 aaKnown RBP17.07■□□□□ 0.32
CNOT9-208ENST00000542068 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 PSMD14O00487 310 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 TXKP42681 527 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 CCDC181Q5TID7 509 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 DYMQ7RTS9 669 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 TMC4Q7Z404 712 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 LRRC47Q8N1G4 583 aaKnown RBP17.07■□□□□ 0.32
CNOT9-208ENST00000542068 LRRC15Q8TF66 581 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 CAPN11Q9UMQ6 739 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 CAPN6Q9Y6Q1 641 aa17.07■□□□□ 0.32
CNOT9-208ENST00000542068 AKR1B10O60218 316 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 SLURP2P0DP57 97 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 PLCG1P19174 1290 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 TECP42680 631 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 CT47A1Q5JQC4 288 aaPredicted RBP17.06■□□□□ 0.32
CNOT9-208ENST00000542068 WDR93Q6P2C0 686 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 FAM76AQ8TAV0 307 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 SEC63Q9UGP8 760 aaKnown RBP17.06■□□□□ 0.32
CNOT9-208ENST00000542068 ATP1A2P50993 1020 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 PPP2R5BQ15173 497 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
CNOT9-208ENST00000542068 IL17RBQ9NRM6 502 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 ANAPC4Q9UJX5 808 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 THRAP3Q9Y2W1 955 aaKnown RBP17.06■□□□□ 0.32
CNOT9-208ENST00000542068 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 ARID5AQ03989 594 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 CKAP4Q07065 602 aaKnown RBP17.06■□□□□ 0.32
CNOT9-208ENST00000542068 EYA3Q99504 573 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 USP21Q9UK80 565 aa17.06■□□□□ 0.32
CNOT9-208ENST00000542068 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 ESYT3A0FGR9 886 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 RPS6KA4O75676 772 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 CALML3P27482 149 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 DNM2P50570 870 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
CNOT9-208ENST00000542068 EPHB6O15197 1021 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
CNOT9-208ENST00000542068 GTF2IP78347 998 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 CCDC70Q6NSX1 233 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 CCNI2Q6ZMN8 369 aaPredicted RBP17.05■□□□□ 0.32
CNOT9-208ENST00000542068 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 IFT81Q8WYA0 676 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 DNAJC7Q99615 494 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 IFIH1Q9BYX4 1025 aaKnown RBP17.05■□□□□ 0.32
CNOT9-208ENST00000542068 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 ITGB4P16144 1822 aa17.05■□□□□ 0.32
CNOT9-208ENST00000542068 ZEB2O60315 1214 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 SCNN1DP51172 638 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 RCSD1Q6JBY9 416 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 MS4A14Q96JA4 679 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 DUSP9Q99956 384 aaKnown RBP17.04■□□□□ 0.32
CNOT9-208ENST00000542068 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 ZNF263O14978 683 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 FECHP22830 423 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 LRRC41Q15345 812 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 RRAGAQ7L523 313 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 SH2D3CQ8N5H7 860 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 ZNF507Q8TCN5 953 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 RUFY1Q96T51 708 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 CENPHQ9H3R5 247 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 NLRC4Q9NPP4 1024 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 MYH6P13533 1939 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 GNGT1P63211 74 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 TDRD12Q587J7 1177 aaKnown RBP17.04■□□□□ 0.32
CNOT9-208ENST00000542068 TTI2Q6NXR4 508 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 CABP7Q86V35 215 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 GJA10Q969M2 543 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 COA7Q96BR5 231 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
CNOT9-208ENST00000542068 LRP6O75581 1613 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 PRPF6O94906 941 aaKnown RBP17.03■□□□□ 0.32
CNOT9-208ENST00000542068 EIF4A3P38919 411 aaKnown RBP17.03■□□□□ 0.32
CNOT9-208ENST00000542068 C12orf60Q5U649 245 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 BCAS4Q8TDM0 211 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
CNOT9-208ENST00000542068 AGPSO00116 658 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 KLRC4O43908 158 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 PPFIA4O75335 1185 aa17.03■□□□□ 0.32
CNOT9-208ENST00000542068 EEF1GP26641 437 aaKnown RBP17.03■□□□□ 0.32
CNOT9-208ENST00000542068 TNNI2P48788 182 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms