RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 GNEQ9Y223 722 aaKnown RBP20.35■□□□□ 0.85
TRPT1-212ENST00000542040 IFIT3O14879 490 aaKnown RBP20.34■□□□□ 0.85
TRPT1-212ENST00000542040 FPGSQ05932 587 aa20.34■□□□□ 0.85
TRPT1-212ENST00000542040 DUSP28Q4G0W2 176 aa20.34■□□□□ 0.85
TRPT1-212ENST00000542040 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
TRPT1-212ENST00000542040 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
TRPT1-212ENST00000542040 CLEC4DQ8WXI8 215 aa20.34■□□□□ 0.85
TRPT1-212ENST00000542040 VAT1LQ9HCJ6 419 aa20.34■□□□□ 0.85
TRPT1-212ENST00000542040 TRIOBPQ9H2D6 2365 aa20.34■□□□□ 0.85
TRPT1-212ENST00000542040 TRIM43BA6NCK2 446 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 SOX1O00570 391 aaPredicted RBP20.33■□□□□ 0.85
TRPT1-212ENST00000542040 KPNA6O60684 536 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 SMPD1P17405 629 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 TAPT1Q6NXT6 567 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 TMEM199Q8N511 208 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 DEFB123Q8N688 67 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 SAMD3Q8N6K7 520 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 NSUN6Q8TEA1 469 aaKnown RBP20.33■□□□□ 0.85
TRPT1-212ENST00000542040 TRIM43Q96BQ3 446 aaPredicted RBP20.33■□□□□ 0.85
TRPT1-212ENST00000542040 AMNQ9BXJ7 453 aa20.33■□□□□ 0.85
TRPT1-212ENST00000542040 MAP3K20Q9NYL2 800 aaKnown RBP20.33■□□□□ 0.85
TRPT1-212ENST00000542040 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.32■□□□□ 0.84
TRPT1-212ENST00000542040 MYADML2A6NDP7 307 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 SGSM2O43147 1006 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 TIMP1P01033 207 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 CDK7P50613 346 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 FAAP100Q0VG06 881 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 WTAPQ15007 396 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 CASC1Q6TDU7 716 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 CATIPQ7Z7H3 387 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 IWS1Q96ST2 819 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 SMCHD1A6NHR9 2005 aa20.32■□□□□ 0.84
TRPT1-212ENST00000542040 KLRF2D3W0D1 207 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 CYP21A2P08686 494 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 BEX3Q00994 111 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.848e-7■■■■□ 21.4
TRPT1-212ENST00000542040 ITGA7Q13683 1181 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 TTLL4Q14679 1199 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 FAM109BQ6ICB4 259 aaPredicted RBP20.31■□□□□ 0.84
TRPT1-212ENST00000542040 SLC30A10Q6XR72 485 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 SH3RF1Q7Z6J0 888 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 TMTC2Q8N394 836 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 PDGFCQ9NRA1 345 aa20.31■□□□□ 0.84
TRPT1-212ENST00000542040 RBM47A0AV96 593 aaKnown RBP20.3■□□□□ 0.84
TRPT1-212ENST00000542040 ADCY6O43306 1168 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 STXBP2Q15833 593 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 QRICH1Q2TAL8 776 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 CXCL17Q6UXB2 119 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 OR6J1Q8NGC5 347 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 MTA3Q9BTC8 594 aa20.3■□□□□ 0.84
TRPT1-212ENST00000542040 E7EWF7 191 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 NEFLP07196 543 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 PTH1RQ03431 593 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 SEC23AQ15436 765 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 SHHQ15465 462 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 ZNF697Q5TEC3 545 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 ARHGEF16Q5VV41 709 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 MFSD5Q6N075 450 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
TRPT1-212ENST00000542040 RNPC3Q96LT9 517 aaKnown RBP20.29■□□□□ 0.84
TRPT1-212ENST00000542040 MTIF3Q9H2K0 278 aaKnown RBP20.29■□□□□ 0.84
TRPT1-212ENST00000542040 JMJD4Q9H9V9 463 aa20.29■□□□□ 0.84
TRPT1-212ENST00000542040 ZBTB5O15062 677 aa20.28■□□□□ 0.84
TRPT1-212ENST00000542040 TXNP10599 105 aaKnown RBP20.28■□□□□ 0.84
TRPT1-212ENST00000542040 EDNRBP24530 442 aa20.28■□□□□ 0.84
TRPT1-212ENST00000542040 KIF5BP33176 963 aa20.28■□□□□ 0.84
TRPT1-212ENST00000542040 SMAD3P84022 425 aaKnown RBP20.28■□□□□ 0.84
TRPT1-212ENST00000542040 TMEM67Q5HYA8 995 aa20.28■□□□□ 0.84
TRPT1-212ENST00000542040 PURBQ96QR8 312 aaKnown RBP20.28■□□□□ 0.84
TRPT1-212ENST00000542040 RMDN3Q96TC7 470 aa20.28■□□□□ 0.84
TRPT1-212ENST00000542040 ASTN1O14525 1302 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 PALM3A6NDB9 673 aaPredicted RBP20.27■□□□□ 0.84
TRPT1-212ENST00000542040 CTAGE5O15320 804 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 RNF20Q5VTR2 975 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 CYB5R4Q7L1T6 521 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 FAM126BQ8IXS8 530 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 MTG1Q9BT17 334 aaPredicted RBP20.27■□□□□ 0.84
TRPT1-212ENST00000542040 CPVLQ9H3G5 476 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 TBX21Q9UL17 535 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.84
TRPT1-212ENST00000542040 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
TRPT1-212ENST00000542040 CFBP00751 764 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 MYL3P08590 195 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 GNAQP50148 359 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 GRM4Q14833 912 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 KCNV1Q6PIU1 500 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 SLC43A3Q8NBI5 491 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 CTCFLQ8NI51 663 aaPredicted RBP20.26■□□□□ 0.83
TRPT1-212ENST00000542040 SYTL5Q8TDW5 730 aaPredicted RBP20.26■□□□□ 0.83
TRPT1-212ENST00000542040 MAP3K14Q99558 947 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 LZTS2Q9BRK4 669 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 IL25Q9H293 177 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 MAD2L2Q9UI95 211 aa20.26■□□□□ 0.83
TRPT1-212ENST00000542040 RBM8AQ9Y5S9 174 aaKnown RBP20.26■□□□□ 0.83
TRPT1-212ENST00000542040 MCM5P33992 734 aa20.25■□□□□ 0.83
TRPT1-212ENST00000542040 PSRC1Q6PGN9 363 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms