RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 EEPD1Q7L9B9 569 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 ENAHQ8N8S7 591 aaPredicted RBP13.32□□□□□ -0.28
VTN-203ENST00000542029 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
VTN-203ENST00000542029 PDGFCQ9NRA1 345 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
VTN-203ENST00000542029 ASTN1O14525 1302 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
VTN-203ENST00000542029 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 CPT1AP50416 773 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 BEX3Q00994 111 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 ITGA7Q13683 1181 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
VTN-203ENST00000542029 IFIT1BQ5T764 474 aaKnown RBP13.31□□□□□ -0.28
VTN-203ENST00000542029 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 Q7L0L9 218 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 FAM126BQ8IXS8 530 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 TMEM199Q8N511 208 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 SLC17A8Q8NDX2 589 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 UBA5Q9GZZ9 404 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 POLR3EQ9NVU0 708 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 MRPL11Q9Y3B7 192 aaKnown RBP13.31□□□□□ -0.28
VTN-203ENST00000542029 TNKSO95271 1327 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 ABCB11O95342 1321 aa13.31□□□□□ -0.28
VTN-203ENST00000542029 ZNFX1Q9P2E3 1918 aaKnown RBP13.31□□□□□ -0.28
VTN-203ENST00000542029 FRMPD3Q5JV73 1810 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 TMEM265A0A087WTH1 108 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
VTN-203ENST00000542029 KPNA6O60684 536 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
VTN-203ENST00000542029 EDNRBP24530 442 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 PDE4AP27815 886 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 IRX5P78411 483 aaPredicted RBP13.3□□□□□ -0.28
VTN-203ENST00000542029 TRAF1Q13077 416 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 PPP2R5BQ15173 497 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 SLC30A10Q6XR72 485 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 ADGRF4Q8IZF3 695 aa13.3□□□□□ -0.28
VTN-203ENST00000542029 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
VTN-203ENST00000542029 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
VTN-203ENST00000542029 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.29□□□□□ -0.28
VTN-203ENST00000542029 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.29□□□□□ -0.28
VTN-203ENST00000542029 ERICH2A1L162 156 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 CD4P01730 458 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 SUPT20HL2P0C7V6 817 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 CHMLP26374 656 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
VTN-203ENST00000542029 USH1GQ495M9 461 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
VTN-203ENST00000542029 FBXO11Q86XK2 927 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
VTN-203ENST00000542029 MTIF3Q9H2K0 278 aaKnown RBP13.29□□□□□ -0.28
VTN-203ENST00000542029 DNAH12Q6ZR08 3092 aa13.29□□□□□ -0.28
VTN-203ENST00000542029 EPHB4P54760 987 aa13.28□□□□□ -0.28
VTN-203ENST00000542029 RALYLQ86SE5 291 aaKnown RBP13.28□□□□□ -0.28
VTN-203ENST00000542029 SAMD3Q8N6K7 520 aa13.28□□□□□ -0.28
VTN-203ENST00000542029 IWS1Q96ST2 819 aa13.28□□□□□ -0.28
VTN-203ENST00000542029 AMNQ9BXJ7 453 aa13.28□□□□□ -0.28
VTN-203ENST00000542029 MAP3K20Q9NYL2 800 aaKnown RBP13.28□□□□□ -0.28
VTN-203ENST00000542029 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
VTN-203ENST00000542029 SEC23AQ15436 765 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 OR6J1Q8NGC5 347 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 NCOA7Q8NI08 942 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
VTN-203ENST00000542029 MTG1Q9BT17 334 aaPredicted RBP13.27□□□□□ -0.29
VTN-203ENST00000542029 PPP1R12CQ9BZL4 782 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 IL25Q9H293 177 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 CPVLQ9H3G5 476 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 SEMA6BQ9H3T3 888 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 HIPK3Q9H422 1215 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 JMJD4Q9H9V9 463 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 PLXNA1Q9UIW2 1896 aa13.27□□□□□ -0.29
VTN-203ENST00000542029 A6NJR5 290 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 KLRF2D3W0D1 207 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 IFIT3O14879 490 aaKnown RBP13.26□□□□□ -0.29
VTN-203ENST00000542029 ZBTB5O15062 677 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 SGSM2O43147 1006 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 CYP21A2P08686 494 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 TXNP10599 105 aaKnown RBP13.26□□□□□ -0.29
VTN-203ENST00000542029 PURAQ00577 322 aaKnown RBP13.26□□□□□ -0.29
VTN-203ENST00000542029 STXBP2Q15833 593 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
VTN-203ENST00000542029 GUCD1Q96NT3 240 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.26□□□□□ -0.29
VTN-203ENST00000542029 ALDH8A1Q9H2A2 487 aaPredicted RBP13.26□□□□□ -0.29
VTN-203ENST00000542029 VAT1LQ9HCJ6 419 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 IL23AQ9NPF7 189 aa13.26□□□□□ -0.29
VTN-203ENST00000542029 GRIN2DO15399 1336 aa13.25□□□□□ -0.29
VTN-203ENST00000542029 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
VTN-203ENST00000542029 MYL3P08590 195 aa13.25□□□□□ -0.29
VTN-203ENST00000542029 CSF2RAP15509 400 aa13.25□□□□□ -0.29
VTN-203ENST00000542029 GHRHRQ02643 423 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms