RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 NFIBO00712 420 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 ADCY3O60266 1144 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 COBLO75128 1261 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 XRCC5P13010 732 aaKnown RBP8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 RGS2P41220 211 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 SLC4A3P48751 1232 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 NEK4P51957 841 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 KCTD2Q14681 263 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 PPP2R5BQ15173 497 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 FBXO11Q86XK2 927 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 RAET1EQ8TD07 263 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 PXYLP1Q8TE99 480 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 CLEC4DQ8WXI8 215 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 TRIB2Q92519 343 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 ZNF274Q96GC6 653 aaPredicted RBP8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 AMNQ9BXJ7 453 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 KRTAP4-6Q9BYQ5 205 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 VAT1LQ9HCJ6 419 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 A1CFQ9NQ94 594 aaKnown RBP8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 NAP1L2Q9ULW6 460 aaPredicted RBP8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 OPLAHO14841 1288 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 LARGE1O95461 756 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 IGHA2P01877 340 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 PGK2P07205 417 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ELNP15502 786 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 CYP2B6P20813 491 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 GRK4P32298 578 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ADD1P35611 737 aaKnown RBP8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 RABEP1Q15276 862 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ANKRD1Q15327 319 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 NTRK3Q16288 839 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 CCL14Q16627 93 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ZNF792Q3KQV3 632 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 SLC9C1Q4G0N8 1177 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 SLC30A10Q6XR72 485 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 TNS4Q8IZW8 715 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ZNF687Q8N1G0 1237 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ANKRD35Q8N283 1001 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 CCDC82Q8N4S0 544 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 NPLOC4Q8TAT6 608 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 SH3TC2Q8TF17 1288 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 RRP36Q96EU6 259 aaKnown RBP8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 FGD4Q96M96 766 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 LARP6Q9BRS8 491 aaKnown RBP8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 NCOA5Q9HCD5 579 aaKnown RBP8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 CYP39A1Q9NYL5 469 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 FLRT1Q9NZU1 646 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 SEC63Q9UGP8 760 aaKnown RBP8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 TPCN1Q9ULQ1 816 aa8.08□□□□□ -1.12
LPCAT3-209ENST00000540060 ASTN1O14525 1302 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 hCG_1642624A0A1W2PR95 340 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 PFKFB2O60825 505 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 HMGCRP04035 888 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 INHAP05111 366 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 IFNAR1P17181 557 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 CCT2P78371 535 aaKnown RBP8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 GHRHRQ02643 423 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 SCRN1Q12765 414 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 STK3Q13188 491 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 ME3Q16798 604 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 OLFML2BQ68BL8 750 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 NSMFQ6X4W1 530 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 NOL8Q76FK4 1167 aaKnown RBP8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 DPP9Q86TI2 863 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 FAM133AQ8N9E0 248 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 PIBF1Q8WXW3 757 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 MAML3Q96JK9 1138 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 ZNF333Q96JL9 665 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 TMEM106CQ9BVX2 250 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 MAF1Q9H063 256 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 PCDHA1Q9Y5I3 950 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 MYH7BA7E2Y1 1941 aa8.07□□□□□ -1.12
LPCAT3-209ENST00000540060 PTPDC1A2A3K4 754 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 SOWAHBA6NEL2 793 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 hCG_1984214I3L0E3 225 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 HSD17B4P51659 736 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 RPS6P62753 249 aaKnown RBP8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 CNTN2Q02246 1040 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 ST3GAL1Q11201 340 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 TRIM32Q13049 653 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 TRAF1Q13077 416 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 MAP3K21Q5TCX8 1036 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 RNF207Q6ZRF8 634 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 ZNF467Q7Z7K2 595 aaPredicted RBP8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 ZNF713Q8N859 430 aaPredicted RBP8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 RGS22Q8NE09 1264 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 GPKOWQ92917 476 aaPredicted RBP eCLIP8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 PHKBQ93100 1093 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 GTF3C6Q969F1 213 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 ABHD8Q96I13 439 aa8.06□□□□□ -1.12
LPCAT3-209ENST00000540060 RNF26Q9BY78 433 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms