RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ARMT1Q9H993 441 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 MKNK2Q9HBH9 465 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 RAVER2Q9HCJ3 691 aaKnown RBP7.09□□□□□ -1.27
CPSF7-219ENST00000539952 POLR3EQ9NVU0 708 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 SYNPO2Q9UMS6 1093 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 PRRC2BQ5JSZ5 2229 aaKnown RBP7.09□□□□□ -1.27
CPSF7-219ENST00000539952 CDK5RAP2Q96SN8 1893 aa7.09□□□□□ -1.28
CPSF7-219ENST00000539952 GRIN2DO15399 1336 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-219ENST00000539952 GOLIM4O00461 696 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 PRKAB2O43741 272 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 TAP1Q03518 808 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 UBE3CQ15386 1083 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 PUS10Q3MIT2 529 aaKnown RBP7.08□□□□□ -1.28
CPSF7-219ENST00000539952 SBK1Q52WX2 424 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-219ENST00000539952 ZSCAN25Q6NSZ9 544 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 CTR9Q6PD62 1173 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 TLK2Q86UE8 772 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 ZNF444Q8N0Y2 327 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-219ENST00000539952 GJD3Q8N144 294 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 FAM133AQ8N9E0 248 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 CHURC1Q8WUH1 139 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 ARNTL2Q8WYA1 636 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 KHSRPQ92945 711 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPSF7-219ENST00000539952 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 SCLYQ96I15 445 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 WNT8AQ9H1J5 351 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 ALDH8A1Q9H2A2 487 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-219ENST00000539952 ACAD9Q9H845 621 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 CERS4Q9HA82 394 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 ZNF287Q9HBT7 754 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 C11orf16Q9NQ32 467 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 CLIP2Q9UDT6 1046 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 COG6Q9Y2V7 657 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 FOCADQ5VW36 1801 aa7.08□□□□□ -1.28
CPSF7-219ENST00000539952 MUC3AQ02505 3323 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 LOC102724159A0A0B4J2E5 919 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 KPNA6O60684 536 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 MBD4O95243 580 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 PARNO95453 639 aaKnown RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 NDUFB10O96000 172 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 IFIT2P09913 472 aaKnown RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 IQCF3P0C7M6 154 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 SMPD1P17405 629 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 ADD2P35612 726 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 CNTN2Q02246 1040 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 PTPN11Q06124 597 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 GRB10Q13322 594 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 BFSP2Q13515 415 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 PWP2Q15269 919 aaKnown RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 L1TD1Q5T7N2 865 aaKnown RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 GIMAP6Q6P9H5 292 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 DEFB128Q7Z7B8 93 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 HERC6Q8IVU3 1022 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 FAM178BQ8IXR5 827 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 RHPN1Q8TCX5 695 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 VWCEQ96DN2 955 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 FGD4Q96M96 766 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 DNAJC2Q99543 621 aaKnown RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 NUP88Q99567 741 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 FTOQ9C0B1 505 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 VTA1Q9NP79 307 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.07□□□□□ -1.28
CPSF7-219ENST00000539952 SLC4A4Q9Y6R1 1079 aa7.07□□□□□ -1.28
CPSF7-219ENST00000539952 ASTN1O14525 1302 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 TNKSO95271 1327 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 CDH23Q9H251 3354 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 CYP2D7A0A087X1C5 515 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 SOWAHBA6NEL2 793 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 GRXCR2A6NFK2 248 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 PLA2G6O60733 806 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 CYP2C9P11712 490 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 BMP3P12645 472 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 KCNJ6P48051 423 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 MRE11P49959 708 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 CPT1AP50416 773 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 PSMC6P62333 389 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 LRRFIP1Q32MZ4 808 aaKnown RBP7.06□□□□□ -1.28
CPSF7-219ENST00000539952 LEXMQ3ZCV2 418 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 DUSP28Q4G0W2 176 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 SMYD5Q6GMV2 418 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 TAPT1Q6NXT6 567 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 FAM160B2Q86V87 743 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 STAG1Q8WVM7 1258 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 DDX12PQ92771 950 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 COL26A1Q96A83 441 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 KIF1BPQ96EK5 621 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 MTG1Q9BT17 334 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-219ENST00000539952 ZBED2Q9BTP6 218 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 UPF2Q9HAU5 1272 aaKnown RBP7.06□□□□□ -1.28
CPSF7-219ENST00000539952 A1CFQ9NQ94 594 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms