RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SEMA6BQ9H3T3 888 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 CNNM2Q9H8M5 875 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 NKRFO15226 690 aaKnown RBP eCLIP17.91■□□□□ 0.46
UBE3B-211ENST00000539843 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
UBE3B-211ENST00000539843 KDM4AO75164 1064 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 PNMA1Q8ND90 353 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 DNERQ8NFT8 737 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 CDX2Q99626 313 aaPredicted RBP17.91■□□□□ 0.46
UBE3B-211ENST00000539843 UBAC1Q9BSL1 405 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 WDR11Q9BZH6 1224 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 MAF1Q9H063 256 aa17.91■□□□□ 0.46
UBE3B-211ENST00000539843 SUPT20HL2P0C7V6 817 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 IRX5P78411 483 aaPredicted RBP17.9■□□□□ 0.46
UBE3B-211ENST00000539843 PPP2R5BQ15173 497 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 ASPRV1Q53RT3 343 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 TAPT1Q6NXT6 567 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 OR6J1Q8NGC5 347 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 EXOC6Q8TAG9 804 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 ZKSCAN3Q9BRR0 538 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 HIPK3Q9H422 1215 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 PDGFCQ9NRA1 345 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 NEDD4P46934 1319 aa17.9■□□□□ 0.46
UBE3B-211ENST00000539843 CTAGE5O15320 804 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 IGHDP01880 384 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 FOSL2P15408 326 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 CSF2RAP15509 400 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 EPHB4P54760 987 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 RPS6P62753 249 aaKnown RBP17.89■□□□□ 0.45
UBE3B-211ENST00000539843 USH1GQ495M9 461 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 SLC30A10Q6XR72 485 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 MCF2L2Q86YR7 1114 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 SCFD2Q8WU76 684 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 ZSCAN10Q96SZ4 725 aaPredicted RBP17.89■□□□□ 0.45
UBE3B-211ENST00000539843 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.89■□□□□ 0.45
UBE3B-211ENST00000539843 MCM3APO60318 1980 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 ASTN1O14525 1302 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 ABCB11O95342 1321 aa17.89■□□□□ 0.45
UBE3B-211ENST00000539843 KPNA6O60684 536 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 CD4P01730 458 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 PARP1P09874 1014 aaKnown RBP17.88■□□□□ 0.45
UBE3B-211ENST00000539843 DNAJB2P25686 324 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 TRDNQ13061 729 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 TTLL4Q14679 1199 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 CDC37Q16543 378 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-211ENST00000539843 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.88■□□□□ 0.45
UBE3B-211ENST00000539843 RPUSD2Q8IZ73 545 aaKnown RBP17.88■□□□□ 0.45
UBE3B-211ENST00000539843 SLC43A3Q8NBI5 491 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 MAFAQ8NHW3 353 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-211ENST00000539843 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 TIFAQ96CG3 184 aa17.88■□□□□ 0.45
UBE3B-211ENST00000539843 B4E1Z4 1266 aa17.87■□□□□ 0.45
UBE3B-211ENST00000539843 MYL3P08590 195 aa17.87■□□□□ 0.45
UBE3B-211ENST00000539843 GOLGA8HP0CJ92 632 aa17.87■□□□□ 0.45
UBE3B-211ENST00000539843 CLEC4DQ8WXI8 215 aa17.87■□□□□ 0.45
UBE3B-211ENST00000539843 PURBQ96QR8 312 aaKnown RBP17.87■□□□□ 0.45
UBE3B-211ENST00000539843 MTG1Q9BT17 334 aaPredicted RBP17.87■□□□□ 0.45
UBE3B-211ENST00000539843 IL23AQ9NPF7 189 aa17.87■□□□□ 0.45
UBE3B-211ENST00000539843 MRPL11Q9Y3B7 192 aaKnown RBP17.87■□□□□ 0.45
UBE3B-211ENST00000539843 TNKSO95271 1327 aa17.87■□□□□ 0.45
UBE3B-211ENST00000539843 CYP2C18P33260 490 aa17.86■□□□□ 0.45
UBE3B-211ENST00000539843 RAB30Q15771 203 aa17.86■□□□□ 0.45
UBE3B-211ENST00000539843 TMEM240Q5SV17 173 aa17.86■□□□□ 0.45
UBE3B-211ENST00000539843 IFIT1BQ5T764 474 aaKnown RBP17.86■□□□□ 0.45
UBE3B-211ENST00000539843 MYLIPQ8WY64 445 aa17.86■□□□□ 0.45
UBE3B-211ENST00000539843 UBA5Q9GZZ9 404 aa17.86■□□□□ 0.45
UBE3B-211ENST00000539843 MSRAQ9UJ68 235 aa17.86■□□□□ 0.45
UBE3B-211ENST00000539843 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
UBE3B-211ENST00000539843 RBM47A0AV96 593 aaKnown RBP17.85■□□□□ 0.45
UBE3B-211ENST00000539843 ERICH2A1L162 156 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 LRRC37A2A6NM11 1700 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 FGBP02675 491 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 ACRP10323 421 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 PSMC6P62333 389 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 TRAF1Q13077 416 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 FAM47CQ5HY64 1035 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 ZNF365Q70YC5 407 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 NSUN6Q8TEA1 469 aaKnown RBP17.85■□□□□ 0.45
UBE3B-211ENST00000539843 ANKS1AQ92625 1134 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
UBE3B-211ENST00000539843 NOD1Q9Y239 953 aa17.85■□□□□ 0.45
UBE3B-211ENST00000539843 B4GALT4O60513 344 aa17.84■□□□□ 0.45
UBE3B-211ENST00000539843 PFKMP08237 780 aa17.84■□□□□ 0.45
UBE3B-211ENST00000539843 TXNP10599 105 aaKnown RBP17.84■□□□□ 0.45
UBE3B-211ENST00000539843 EDNRBP24530 442 aa17.84■□□□□ 0.45
UBE3B-211ENST00000539843 FBXO11Q86XK2 927 aa17.84■□□□□ 0.45
UBE3B-211ENST00000539843 ADGRF4Q8IZF3 695 aa17.84■□□□□ 0.45
UBE3B-211ENST00000539843 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
UBE3B-211ENST00000539843 GAS2L1Q99501 681 aaPredicted RBP17.84■□□□□ 0.45
UBE3B-211ENST00000539843 ALDH8A1Q9H2A2 487 aaPredicted RBP17.84■□□□□ 0.45
UBE3B-211ENST00000539843 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
UBE3B-211ENST00000539843 CCL23P55773 120 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 PURAQ00577 322 aaKnown RBP17.83■□□□□ 0.44
UBE3B-211ENST00000539843 SART3Q15020 963 aaKnown RBP17.83■□□□□ 0.44
UBE3B-211ENST00000539843 STXBP2Q15833 593 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 ARHGEF16Q5VV41 709 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 RALYLQ86SE5 291 aaKnown RBP17.83■□□□□ 0.44
UBE3B-211ENST00000539843 HERVK_113Q902F9 699 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms