RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 LEMD3Q9Y2U8 911 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 PHACTR2O75167 634 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 GNAQP50148 359 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 PPP4CP60510 307 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 RAD51AP2Q09MP3 1159 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 ECM1Q16610 540 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 P2RX5Q93086 422 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 CCDC51Q96ER9 411 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
UBE3B-210ENST00000539599 PSMB7Q99436 277 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 FAM207AQ9NSI2 230 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-210ENST00000539599 MAGEC2Q9UBF1 373 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-210ENST00000539599 PCDHAC2Q9Y5I4 1007 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 MYMKA6NI61 221 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 IDEP14735 1019 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 GRB10Q13322 594 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 MIIPQ5JXC2 388 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 DPP8Q6V1X1 898 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-210ENST00000539599 DAGLBQ8NCG7 672 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 MMS19Q96T76 1030 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 TBC1D7Q9P0N9 293 aa15.74■□□□□ 0.11
UBE3B-210ENST00000539599 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
UBE3B-210ENST00000539599 PDHBP11177 359 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 TNNI2P48788 182 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 GSTO1P78417 241 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 AMPD2Q01433 879 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 APBA1Q02410 837 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 VPS72Q15906 364 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 SOGA3Q5TF21 947 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 REXO1Q8N1G1 1221 aaKnown RBP15.73■□□□□ 0.11
UBE3B-210ENST00000539599 NEDD1Q8NHV4 660 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
UBE3B-210ENST00000539599 BLOC1S4Q9NUP1 217 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 MYO6Q9UM54 1294 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 CDK5RAP2Q96SN8 1893 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 MYH1P12882 1939 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 GPR75-ASB3A0A0A6YYF3 556 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 ZNF263O14978 683 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 PPP1R11O60927 126 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-210ENST00000539599 CACNB3P54284 484 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 KCTD19Q17RG1 926 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-210ENST00000539599 BEND6Q5SZJ8 279 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-210ENST00000539599 ZFP91Q96JP5 570 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-210ENST00000539599 PNMA5Q96PV4 448 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 FGFBP2Q9BYJ0 223 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 SMARCAL1Q9NZC9 954 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 GGA1Q9UJY5 639 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 USP21Q9UK80 565 aa15.73■□□□□ 0.11
UBE3B-210ENST00000539599 STIM1Q13586 685 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 KCNB1Q14721 858 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 DNAJC7Q99615 494 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 DAGLAQ9Y4D2 1042 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 CTAGE15A4D2H0 777 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 CTAGE8P0CG41 777 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 TMED8Q6PL24 325 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-210ENST00000539599 KIAA1328Q86T90 577 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 CTAGE6Q86UF2 777 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 CTAGE4Q8IX94 777 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 PYM1Q9BRP8 204 aaKnown RBP15.72■□□□□ 0.11
UBE3B-210ENST00000539599 UBXN6Q9BZV1 441 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 TTYH3Q9C0H2 523 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 THAP9Q9H5L6 903 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 NHEJ1Q9H9Q4 299 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-210ENST00000539599 CAPN11Q9UMQ6 739 aa15.72■□□□□ 0.11
UBE3B-210ENST00000539599 SRGNP10124 158 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 CCNE1P24864 410 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 SNAP25P60880 206 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 ANKRD13CQ8N6S4 541 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 CEP112Q8N8E3 955 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 TBC1D16Q8TBP0 767 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 POLD4Q9HCU8 107 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 EHD2Q9NZN4 543 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-210ENST00000539599 LRWD1Q9UFC0 647 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 SERPINB2P05120 415 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 EEF1GP26641 437 aaKnown RBP15.71■□□□□ 0.11
UBE3B-210ENST00000539599 CYP2C19P33261 490 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 CALCRLQ16602 461 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 KRT25Q7Z3Z0 450 aa15.71■□□□□ 0.11
UBE3B-210ENST00000539599 FAM170AA1A519 330 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
UBE3B-210ENST00000539599 LDHCP07864 332 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 GYS1P13807 737 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 CERS5Q8N5B7 392 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 JAKMIP2Q96AA8 810 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 MLXIPQ9HAP2 919 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 KCNQ5Q9NR82 932 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 CCDC151A5D8V7 595 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 PDE2AO00408 941 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-210ENST00000539599 MPHOSPH10O00566 681 aaKnown RBP15.7■□□□□ 0.1
UBE3B-210ENST00000539599 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-210ENST00000539599 ZFPM1Q8IX07 1006 aa15.7■□□□□ 0.1
UBE3B-210ENST00000539599 LRRIQ3A6PVS8 624 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-210ENST00000539599 DNM2P50570 870 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms