RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FAM114A1Q8IWE2 563 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 ATP6V1G3Q96LB4 118 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 PSMB7Q99436 277 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 EHD2Q9NZN4 543 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 DOCK2Q92608 1830 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 HMGB1P1B2RPK0 211 aaPredicted RBP20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 PLEKP08567 350 aaPredicted RBP20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 HDLBPQ00341 1268 aaKnown RBP20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 C6orf89Q6UWU4 347 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 DUSP9Q99956 384 aaKnown RBP20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 NFU1Q9UMS0 254 aa20.63■□□□□ 0.89
SFSWAP-207ENST00000538548 TMCO5BA8MYB1 307 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 KLRC4O43908 158 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 CDR1P51861 262 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 KIF11P52732 1056 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 IFT88Q13099 833 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 CATIPQ7Z7H3 387 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 ZSCAN29Q8IWY8 852 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 RNF14Q9UBS8 474 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 KCPQ6ZWJ8 1503 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 COL18A1P39060 1754 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 GLI1P08151 1106 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 CARSP49589 748 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 SEC24CP53992 1094 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 CFAP221Q4G0U5 840 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 NAALADL2Q58DX5 795 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 CEP85LQ5SZL2 805 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 TYW1BQ6NUM6 668 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 ENAHQ8N8S7 591 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 PIK3R5Q8WYR1 880 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 CNOT6LQ96LI5 555 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 ACTR5Q9H9F9 607 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 SLC40A1Q9NP59 571 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 ARHGAP20Q9P2F6 1191 aa20.62■□□□□ 0.89
SFSWAP-207ENST00000538548 NF2P35240 595 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 LPIN2Q92539 896 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 NOC4LQ9BVI4 516 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 POLD4Q9HCU8 107 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 BTG4Q9NY30 223 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 TSKSQ9UJT2 592 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 BICDL2A1A5D9 508 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 ADAMTS2O95450 1211 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 FAM153BP0C7A2 387 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 PUM3Q15397 648 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 FAM153CQ494X1 144 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 MIIPQ5JXC2 388 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 PPP4R3AQ6IN85 833 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 TLR10Q9BXR5 811 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 FAM153AQ9UHL3 310 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 BCORQ6W2J9 1755 aa20.61■□□□□ 0.89
SFSWAP-207ENST00000538548 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 ITGB3BPQ13352 177 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 FKBP15Q5T1M5 1219 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 C2CD5Q86YS7 1000 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 GOLGA6L7A0A1B0GV03 622 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 PJA2O43164 708 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 HEXIM1O94992 359 aaKnown RBP20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 CALM1P0DP23 149 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 CALM2P0DP24 149 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 CALM3P0DP25 149 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 C3orf20Q8ND61 904 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 WHAMMQ8TF30 809 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 ZSCAN10Q96SZ4 725 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 EPB41L5Q9HCM4 733 aa20.6■□□□□ 0.89
SFSWAP-207ENST00000538548 E7EVH7 732 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 NCK2O43639 380 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 CCNE1P24864 410 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 CTSWP56202 376 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 IFIT1BQ5T764 474 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 CCDC121Q6ZUS5 278 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 TMTC3Q6ZXV5 915 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 ARFGAP2Q8N6H7 521 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 C4orf32Q8N8J7 132 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 P2RX5Q93086 422 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 ZNF622Q969S3 477 aaKnown RBP eCLIP20.59■□□□□ 0.893e-7■□□□□ 10.5
SFSWAP-207ENST00000538548 VEZTQ9HBM0 779 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 AKR1B10O60218 316 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 EIF4A3P38919 411 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 GUCY2DQ02846 1103 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 TROAPQ12815 778 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 SYNE4Q8N205 404 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 IFT81Q8WYA0 676 aa20.59■□□□□ 0.89
SFSWAP-207ENST00000538548 FGFR2P21802 821 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 NLRP5P59047 1200 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 CCDC50Q8IVM0 306 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 RASSF8Q8NHQ8 419 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 N4BP2L2Q92802 583 aaPredicted RBP20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 CYFIP2Q96F07 1278 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 KBTBD4Q9NVX7 518 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 ANAPC4Q9UJX5 808 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 CNTNAP5Q8WYK1 1306 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 SNCBQ16143 134 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 IQCA1Q86XH1 822 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 EEF2KMTQ96G04 330 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 CCDC114Q96M63 670 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 NOX5Q96PH1 765 aa20.58■□□□□ 0.89
SFSWAP-207ENST00000538548 ESYT3A0FGR9 886 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms