RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 TMTC3Q6ZXV5 915 aa15.27■□□□□ 0.04
COPS7A-207ENST00000538375 ARMCX2Q7L311 632 aa15.27■□□□□ 0.04
COPS7A-207ENST00000538375 EEPD1Q7L9B9 569 aa15.27■□□□□ 0.04
COPS7A-207ENST00000538375 RGS22Q8NE09 1264 aa15.27■□□□□ 0.04
COPS7A-207ENST00000538375 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.27■□□□□ 0.04
COPS7A-207ENST00000538375 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.04
COPS7A-207ENST00000538375 DDX49Q9Y6V7 483 aaKnown RBP15.27■□□□□ 0.04
COPS7A-207ENST00000538375 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
COPS7A-207ENST00000538375 SYNGAP1Q96PV0 1343 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 IGHA2P01877 340 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 CDC27P30260 824 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 ADD1P35611 737 aaKnown RBP15.26■□□□□ 0.03
COPS7A-207ENST00000538375 ACVR2BQ13705 512 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 FGD4Q96M96 766 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 TAAR1Q96RJ0 339 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
COPS7A-207ENST00000538375 ABHD16BQ9H3Z7 469 aa15.26■□□□□ 0.03
COPS7A-207ENST00000538375 V9GY48 417 aaPredicted RBP15.26■□□□□ 0.03
COPS7A-207ENST00000538375 B4DLN1 442 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 SEPT4O43236 478 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 MSCO60682 206 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 ZNF865P0CJ78 1059 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 PDIA3P30101 505 aaKnown RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 ALDH5A1P51649 535 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 MRPL12P52815 198 aaKnown RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 PDE4DQ08499 809 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 STK3Q13188 491 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 TOB2Q14106 344 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 LHX8Q68G74 356 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 FBXL16Q8N461 479 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-207ENST00000538375 SHISA4Q96DD7 197 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 AGXT2Q9BYV1 514 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 CRISPLD2Q9H0B8 497 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 NRBP1Q9UHY1 535 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 FAM184BQ9ULE4 1060 aa15.25■□□□□ 0.03
COPS7A-207ENST00000538375 GCOM1H8Y6P7 765 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-207ENST00000538375 FARP2O94887 1054 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-207ENST00000538375 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-207ENST00000538375 NEK4P51957 841 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 RCAN1P53805 252 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 AKAP17AQ02040 695 aaKnown RBP15.24■□□□□ 0.03
COPS7A-207ENST00000538375 FCHSD1Q86WN1 690 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 RMDN3Q96TC7 470 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 FAM217BQ9NTX9 383 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-207ENST00000538375 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 PLXNA1Q9UIW2 1896 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 SMCHD1A6NHR9 2005 aa15.24■□□□□ 0.03
COPS7A-207ENST00000538375 ASTN1O14525 1302 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 PPFIA3O75145 1194 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 RARBP10826 455 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 AKR1A1P14550 325 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 CAPN2P17655 700 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 CCDC144BQ3MJ40 725 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 ARHGEF16Q5VV41 709 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 ARRDC4Q8NCT1 418 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 DNERQ8NFT8 737 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
COPS7A-207ENST00000538375 CUL5Q93034 780 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 PAWRQ96IZ0 340 aaKnown RBP15.23■□□□□ 0.03
COPS7A-207ENST00000538375 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 MAF1Q9H063 256 aa15.23■□□□□ 0.03
COPS7A-207ENST00000538375 UPF2Q9HAU5 1272 aaKnown RBP15.23■□□□□ 0.03
COPS7A-207ENST00000538375 CPLX1O14810 134 aa15.22■□□□□ 0.03
COPS7A-207ENST00000538375 OPLAHO14841 1288 aa15.22■□□□□ 0.03
COPS7A-207ENST00000538375 GJC2Q5T442 439 aaPredicted RBP15.22■□□□□ 0.03
COPS7A-207ENST00000538375 NECAB2Q7Z6G3 386 aa15.22■□□□□ 0.03
COPS7A-207ENST00000538375 FBXO16Q8IX29 292 aaPredicted RBP15.22■□□□□ 0.03
COPS7A-207ENST00000538375 GPKOWQ92917 476 aaPredicted RBP eCLIP15.22■□□□□ 0.03
COPS7A-207ENST00000538375 ZNF274Q96GC6 653 aaPredicted RBP15.22■□□□□ 0.03
COPS7A-207ENST00000538375 NCOA5Q9HCD5 579 aaKnown RBP15.22■□□□□ 0.03
COPS7A-207ENST00000538375 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
COPS7A-207ENST00000538375 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
COPS7A-207ENST00000538375 CNTNAP5Q8WYK1 1306 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 MYCLP12524 364 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-207ENST00000538375 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
COPS7A-207ENST00000538375 ADCYAP1R1P41586 468 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 HSD17B4P51659 736 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 EVCP57679 992 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 TNFAIP2Q03169 654 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 ANKRD1Q15327 319 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 ANKLE1Q8NAG6 615 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 DIS3LQ8TF46 1054 aaKnown RBP15.21■□□□□ 0.03
COPS7A-207ENST00000538375 PHKBQ93100 1093 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-207ENST00000538375 SLC26A6Q9BXS9 759 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 SLKQ9H2G2 1235 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-207ENST00000538375 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 PDGFCQ9NRA1 345 aa15.21■□□□□ 0.03
COPS7A-207ENST00000538375 MYH6P13533 1939 aa15.21■□□□□ 0.02
COPS7A-207ENST00000538375 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.02
COPS7A-207ENST00000538375 LOC102724159A0A0B4J2E5 919 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms