RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 CTNNA3Q9UI47 895 aa11.53□□□□□ -0.56
CCDC170-202ENST00000537358 TBX21Q9UL17 535 aa11.53□□□□□ -0.56
CCDC170-202ENST00000537358 RAD50Q92878 1312 aa11.53□□□□□ -0.56
CCDC170-202ENST00000537358 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
CCDC170-202ENST00000537358 MYH6P13533 1939 aa11.52□□□□□ -0.56
CCDC170-202ENST00000537358 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 ITGB8P26012 769 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 CALML3P27482 149 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 CDK7P50613 346 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 ALDH5A1P51649 535 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 NKX3-2P78367 333 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 BEX3Q00994 111 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 PDE4DQ08499 809 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 GSE1Q14687 1217 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 PSRC1Q6PGN9 363 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 CXCL17Q6UXB2 119 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 RNF207Q6ZRF8 634 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 RASGRP2Q7LDG7 609 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 DGKHQ86XP1 1220 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 SEMA6BQ9H3T3 888 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 KAT14Q9H8E8 782 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 GNEQ9Y223 722 aaKnown RBP11.52□□□□□ -0.57
CCDC170-202ENST00000537358 WDR19Q8NEZ3 1342 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 LCTP09848 1927 aa11.52□□□□□ -0.57
CCDC170-202ENST00000537358 NFIBO00712 420 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 SMPD1P17405 629 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 CPT1AP50416 773 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 ITGA7Q13683 1181 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 DUSP28Q4G0W2 176 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 TBC1D10CQ8IV04 446 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 FAM126BQ8IXS8 530 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 DNERQ8NFT8 737 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 GUCD1Q96NT3 240 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 DSCC1Q9BVC3 393 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 PPP1R12CQ9BZL4 782 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 KRT23Q9C075 422 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 CNNM2Q9H8M5 875 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 NEDD4P46934 1319 aa11.51□□□□□ -0.57
CCDC170-202ENST00000537358 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC170-202ENST00000537358 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
CCDC170-202ENST00000537358 KDM4AO75164 1064 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
CCDC170-202ENST00000537358 PPP2R5BQ15173 497 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 TAPT1Q6NXT6 567 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 PNMA1Q8ND90 353 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 CDX2Q99626 313 aaPredicted RBP11.5□□□□□ -0.57
CCDC170-202ENST00000537358 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 UBAC1Q9BSL1 405 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 MAF1Q9H063 256 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 HIPK3Q9H422 1215 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
CCDC170-202ENST00000537358 PDGFCQ9NRA1 345 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 ASTN1O14525 1302 aa11.5□□□□□ -0.57
CCDC170-202ENST00000537358 B4E1Z4 1266 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 CTAGE5O15320 804 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 CD4P01730 458 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 IGHDP01880 384 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 PARP1P09874 1014 aaKnown RBP11.49□□□□□ -0.57
CCDC170-202ENST00000537358 SUPT20HL2P0C7V6 817 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 FOSL2P15408 326 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 CSF2RAP15509 400 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 DNAJB2P25686 324 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 EPHB4P54760 987 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
CCDC170-202ENST00000537358 TRDNQ13061 729 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 USH1GQ495M9 461 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 MCF2L2Q86YR7 1114 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 SLC43A3Q8NBI5 491 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
CCDC170-202ENST00000537358 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC170-202ENST00000537358 ABCB11O95342 1321 aa11.49□□□□□ -0.57
CCDC170-202ENST00000537358 KPNA6O60684 536 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 MYL3P08590 195 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 GOLGA8HP0CJ92 632 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 CYP2C18P33260 490 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 TTLL4Q14679 1199 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 CDC37Q16543 378 aaPredicted RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 TMEM240Q5SV17 173 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 RPUSD2Q8IZ73 545 aaKnown RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 RGS22Q8NE09 1264 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 MAFAQ8NHW3 353 aaPredicted RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 CLEC4DQ8WXI8 215 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 PURBQ96QR8 312 aaKnown RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
CCDC170-202ENST00000537358 IL23AQ9NPF7 189 aa11.48□□□□□ -0.57
CCDC170-202ENST00000537358 MSRAQ9UJ68 235 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms