RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 UBE2Q1Q7Z7E8 422 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 FBXO18Q8NFZ0 1043 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 U2AF1L4Q8WU68 220 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 UBXN4Q92575 508 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 EHD4Q9H223 541 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 RBPJLQ9UBG7 517 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 H0YGN5 161 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 PPP6R2O75170 966 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 ZNF202O95125 648 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 SGPL1O95470 568 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 SHMT1P34896 483 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 NDUFA8P51970 172 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 Q3C1V9 767 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 CERKLQ49MI3 558 aaPredicted RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 CCDC91Q7Z6B0 441 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 RPAINQ86UA6 219 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
CHRNB1-202ENST00000536404 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 TFRCP02786 760 aaKnown RBP13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 CYP2D6P10635 497 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 TUBB4BP68371 445 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 FANCCQ00597 558 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 MYL5Q02045 173 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 TRIM32Q13049 653 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 LCORLQ8N3X6 602 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 DPF3Q92784 378 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 DEFB118Q96PH6 123 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 DNAI1Q9UI46 699 aa13.12□□□□□ -0.31
CHRNB1-202ENST00000536404 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 PRKAB2O43741 272 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 CHGBP05060 677 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 DPCR1Q3MIW9 517 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 SYT10Q6XYQ8 523 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 DEF6Q9H4E7 631 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 ARMT1Q9H993 441 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 MCM9Q9NXL9 1143 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
CHRNB1-202ENST00000536404 FAM237AA0A1B0GTK4 181 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 FARP2O94887 1054 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 SERPINC1P01008 464 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 CYP2B6P20813 491 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 SYKP43405 635 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 FOSBP53539 338 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 GABPAQ06546 454 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 TRDNQ13061 729 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 C12orf42Q96LP6 360 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 PAGR1Q9BTK6 254 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 FTOQ9C0B1 505 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 NCOA5Q9HCD5 579 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 PAK6Q9NQU5 681 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 PRC1O43663 620 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 CNMDO75829 334 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 PFKFB1P16118 471 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 ADD2P35612 726 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 UBASH3AP57075 661 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 ERVK-9P63128 1117 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms