RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PPP1R12BO60237 982 aaPredicted RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 ATP1A2P50993 1020 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 NLRP5P59047 1200 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 C11orf91Q3C1V1 193 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 CCDC40Q4G0X9 1142 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 MXD3Q9BW11 206 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 SH3BP1Q9Y3L3 701 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 WNT7AO00755 349 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PDHBP11177 359 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 RCAN1P53805 252 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PPARDQ03181 441 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PICALMQ13492 652 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PPP2R5BQ15173 497 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 DOK7Q18PE1 504 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 AP1ARQ63HQ0 302 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PPFIBP1Q86W92 1011 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 PNMA1Q8ND90 353 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 CPVLQ9H3G5 476 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 HOOK1Q9UJC3 728 aaKnown RBP15.57■□□□□ 0.08
LIG1-203ENST00000536218 MYO6Q9UM54 1294 aa15.57■□□□□ 0.08
LIG1-203ENST00000536218 DDAH1O94760 285 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 WDR93Q6P2C0 686 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 RASGRP2Q7LDG7 609 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 GPKOWQ92917 476 aaPredicted RBP eCLIP15.56■□□□□ 0.081e-9■■■■■ 32.6
LIG1-203ENST00000536218 HPSEQ9Y251 543 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 COL24A1Q17RW2 1714 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 DUOX1Q9NRD9 1551 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 NID2Q14112 1375 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 ENC1O14682 589 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 ADAMTS3O15072 1205 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 EZRP15311 586 aaKnown RBP15.56■□□□□ 0.08
LIG1-203ENST00000536218 INHBEP58166 350 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 FKBP15Q5T1M5 1219 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 COL23A1Q86Y22 540 aaPredicted RBP15.56■□□□□ 0.08
LIG1-203ENST00000536218 RTFDC1Q9BY42 306 aaPredicted RBP15.56■□□□□ 0.08
LIG1-203ENST00000536218 NFE2L3Q9Y4A8 694 aa15.56■□□□□ 0.08
LIG1-203ENST00000536218 EME2A4GXA9 379 aaPredicted RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 TRIM75PA6NK02 468 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 AGPSO00116 658 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 FSBPO95073 299 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 ARHGAP25P42331 645 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 PHF20Q9BVI0 1012 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 SELENOOQ9BVL4 669 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 DDX20Q9UHI6 824 aaKnown RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 FBXO2Q9UK22 296 aaPredicted RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 GRIN2DO15399 1336 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 CNTNAP5Q8WYK1 1306 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 PPEF1O14829 653 aaPredicted RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 CSRNP2Q9H175 543 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 KIF9Q9HAQ2 790 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 G3V3G9 751 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 PTPREP23469 700 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 SSR1P43307 286 aaKnown RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 TUBB2AQ13885 445 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 METTL16Q86W50 562 aaKnown RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 FOXP4Q8IVH2 680 aaPredicted RBP15.55■□□□□ 0.08
LIG1-203ENST00000536218 TUBB2BQ9BVA1 445 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 SERTAD1Q9UHV2 236 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 PCDHA5Q9Y5H7 936 aa15.55■□□□□ 0.08
LIG1-203ENST00000536218 LY75O60449 1722 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 KLHL33A6NCF5 533 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 USP14P54578 494 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 SF3B2Q13435 895 aaKnown RBP15.54■□□□□ 0.08
LIG1-203ENST00000536218 CCDC114Q96M63 670 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 HDAC6Q9UBN7 1215 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 SRGAP2O75044 1071 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 MYBL2P10244 700 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 SCG2P13521 617 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 IFT88Q13099 833 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 RASGRP4Q8TDF6 673 aa15.54■□□□□ 0.08
LIG1-203ENST00000536218 ZC3H12CQ9C0D7 883 aaKnown RBP15.54■□□□□ 0.08
LIG1-203ENST00000536218 SCNN1DP51172 638 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 PPP4CP60510 307 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 RBL2Q08999 1139 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 ZKSCAN8Q15776 578 aaPredicted RBP15.53■□□□□ 0.08
LIG1-203ENST00000536218 SNCBQ16143 134 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 KCTD16Q68DU8 428 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 SND1Q7KZF4 910 aaKnown RBP eCLIP15.53■□□□□ 0.08
LIG1-203ENST00000536218 ARMC2Q8NEN0 867 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 CAGE1Q8TC20 777 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 EPSTI1Q96J88 318 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 SLC40A1Q9NP59 571 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 SPATS2LQ9NUQ6 558 aaKnown RBP15.53■□□□□ 0.08
LIG1-203ENST00000536218 ZC3H4Q9UPT8 1303 aaKnown RBP15.53■□□□□ 0.08
LIG1-203ENST00000536218 MMP10P09238 476 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 IL1R1P14778 569 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 KIF5BP33176 963 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 GUCA1BQ9UMX6 200 aa15.53■□□□□ 0.08
LIG1-203ENST00000536218 AP1G2O75843 785 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 HOXA10P31260 410 aaPredicted RBP15.52■□□□□ 0.08
LIG1-203ENST00000536218 CDK8P49336 464 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms