RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 FPGSQ05932 587 aa18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 SLC30A10Q6XR72 485 aa18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 ENAHQ8N8S7 591 aaPredicted RBP18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 MTMR10Q9NXD2 777 aa18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 TNKSO95271 1327 aa18.94■□□□□ 0.62
CLSTN3-204ENST00000535313 TIMP1P01033 207 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 RPS6P62753 249 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 USH1GQ495M9 461 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 ASPRV1Q53RT3 343 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 FAM109BQ6ICB4 259 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 CXCL17Q6UXB2 119 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 IL25Q9H293 177 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 CPVLQ9H3G5 476 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 TBX21Q9UL17 535 aa18.93■□□□□ 0.62
CLSTN3-204ENST00000535313 B4DLN1 442 aa18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 DHX16O60231 1041 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 PARP1P09874 1014 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 MRPL12P52815 198 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 PDE4DQ08499 809 aa18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 TRDNQ13061 729 aa18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 CDC37Q16543 378 aaPredicted RBP18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 DUSP28Q4G0W2 176 aa18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 WDR11Q9BZH6 1224 aa18.92■□□□□ 0.62
CLSTN3-204ENST00000535313 LRRC37A2A6NM11 1700 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 COL6A3P12111 3177 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 PTGS1P23219 599 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 IFIT1BQ5T764 474 aaKnown RBP18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 ZNF697Q5TEC3 545 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 FAM126BQ8IXS8 530 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 ADGRF4Q8IZF3 695 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 RGS22Q8NE09 1264 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 DNERQ8NFT8 737 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 SEZ6LQ9BYH1 1024 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 STXBP5LQ9Y2K9 1186 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 LCTP09848 1927 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 ABCB11O95342 1321 aa18.91■□□□□ 0.62
CLSTN3-204ENST00000535313 CHMLP26374 656 aa18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 EPHB4P54760 987 aa18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 ITGA7Q13683 1181 aa18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 MFSD5Q6N075 450 aa18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 SLC17A8Q8NDX2 589 aa18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 MAF1Q9H063 256 aa18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
CLSTN3-204ENST00000535313 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 SMAD3P84022 425 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 PPIGQ13427 754 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 TMEM63BQ5T3F8 832 aa18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 MCF2L2Q86YR7 1114 aa18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 TMEM199Q8N511 208 aa18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 SLC43A3Q8NBI5 491 aa18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 VAT1LQ9HCJ6 419 aa18.89■□□□□ 0.61
CLSTN3-204ENST00000535313 NKRFO15226 690 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 EDNRBP24530 442 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 CPT1AP50416 773 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 PPP2R5BQ15173 497 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 QRICH1Q2TAL8 776 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 BRDTQ58F21 947 aaPredicted RBP18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 FBXO11Q86XK2 927 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 SCFD2Q8WU76 684 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 FAM161BQ96MY7 647 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 POLR3EQ9NVU0 708 aa18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 MRPL11Q9Y3B7 192 aaKnown RBP18.88■□□□□ 0.61
CLSTN3-204ENST00000535313 CD4P01730 458 aa18.87■□□□□ 0.61
CLSTN3-204ENST00000535313 PTH1RQ03431 593 aa18.87■□□□□ 0.61
CLSTN3-204ENST00000535313 CYB5R4Q7L1T6 521 aa18.87■□□□□ 0.61
CLSTN3-204ENST00000535313 PPP1R12CQ9BZL4 782 aa18.87■□□□□ 0.61
CLSTN3-204ENST00000535313 JMJD4Q9H9V9 463 aa18.87■□□□□ 0.61
CLSTN3-204ENST00000535313 GPHNQ9NQX3 736 aaPredicted RBP18.87■□□□□ 0.61
CLSTN3-204ENST00000535313 GRIN2DO15399 1336 aa18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 ERICH2A1L162 156 aa18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 CYP21A2P08686 494 aa18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 PSMC6P62333 389 aa18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 SEC23AQ15436 765 aa18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 RALYLQ86SE5 291 aaKnown RBP18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 NSUN6Q8TEA1 469 aaKnown RBP18.86■□□□□ 0.61
CLSTN3-204ENST00000535313 KLRF2D3W0D1 207 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 IFIT3O14879 490 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 SGSM2O43147 1006 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 MYL3P08590 195 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 TXNP10599 105 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 CSF2RAP15509 400 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 TTLL4Q14679 1199 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 SART3Q15020 963 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 STAG2Q8N3U4 1231 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 SYTL5Q8TDW5 730 aaPredicted RBP18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 TBC1D5Q92609 795 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 GUCD1Q96NT3 240 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 HIPK3Q9H422 1215 aa18.85■□□□□ 0.61
CLSTN3-204ENST00000535313 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 CYP2C18P33260 490 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 TAAR1Q96RJ0 339 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 IWS1Q96ST2 819 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 RMDN3Q96TC7 470 aa18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLSTN3-204ENST00000535313 MTG1Q9BT17 334 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms