RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 DDX49Q9Y6V7 483 aaKnown RBP25.12■■□□□ 1.61
GSDMD-216ENST00000534602 U3KPZ7 1027 aaPredicted RBP25.12■■□□□ 1.61
GSDMD-216ENST00000534602 ZEB2O60315 1214 aa25.11■■□□□ 1.61
GSDMD-216ENST00000534602 PARP1P09874 1014 aaKnown RBP25.11■■□□□ 1.61
GSDMD-216ENST00000534602 ITGB8P26012 769 aa25.11■■□□□ 1.61
GSDMD-216ENST00000534602 CALML3P27482 149 aa25.11■■□□□ 1.61
GSDMD-216ENST00000534602 RPS6P62753 249 aaKnown RBP25.11■■□□□ 1.61
GSDMD-216ENST00000534602 SHHQ15465 462 aa25.11■■□□□ 1.61
GSDMD-216ENST00000534602 KIAA1211Q6ZU35 1233 aa25.11■■□□□ 1.61
GSDMD-216ENST00000534602 ADGRF4Q8IZF3 695 aa25.11■■□□□ 1.61
GSDMD-216ENST00000534602 RBM47A0AV96 593 aaKnown RBP25.1■■□□□ 1.61
GSDMD-216ENST00000534602 B4DLN1 442 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 DYNC1LI2O43237 492 aaPredicted RBP25.1■■□□□ 1.61
GSDMD-216ENST00000534602 MRPL12P52815 198 aaKnown RBP25.1■■□□□ 1.61
GSDMD-216ENST00000534602 BEX3Q00994 111 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 TRDNQ13061 729 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 CDC37Q16543 378 aaPredicted RBP25.1■■□□□ 1.61
GSDMD-216ENST00000534602 DUSP28Q4G0W2 176 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 IFIT1BQ5T764 474 aaKnown RBP25.1■■□□□ 1.61
GSDMD-216ENST00000534602 FAM109BQ6ICB4 259 aaPredicted RBP25.1■■□□□ 1.61
GSDMD-216ENST00000534602 CPVLQ9H3G5 476 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 TBX21Q9UL17 535 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 ABCB11O95342 1321 aa25.1■■□□□ 1.61
GSDMD-216ENST00000534602 EDNRBP24530 442 aa25.09■■□□□ 1.61
GSDMD-216ENST00000534602 SEC23AQ15436 765 aa25.09■■□□□ 1.61
GSDMD-216ENST00000534602 SLC43A3Q8NBI5 491 aa25.09■■□□□ 1.61
GSDMD-216ENST00000534602 SGSM2O43147 1006 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 TIMP1P01033 207 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 CYP21A2P08686 494 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 FPGSQ05932 587 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 USH1GQ495M9 461 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 C9orf50Q5SZB4 431 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 CXCL17Q6UXB2 119 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 FAM126BQ8IXS8 530 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 WDR11Q9BZH6 1224 aa25.08■■□□□ 1.61
GSDMD-216ENST00000534602 LAMA2P24043 3122 aaKnown RBP25.08■■□□□ 1.6
GSDMD-216ENST00000534602 TLR3O15455 904 aaKnown RBP25.07■■□□□ 1.6
GSDMD-216ENST00000534602 PTH1RQ03431 593 aa25.07■■□□□ 1.6
GSDMD-216ENST00000534602 PDE4DQ08499 809 aa25.07■■□□□ 1.6
GSDMD-216ENST00000534602 MTMR10Q9NXD2 777 aa25.07■■□□□ 1.6
GSDMD-216ENST00000534602 QRICH1Q2TAL8 776 aa25.06■■□□□ 1.6
GSDMD-216ENST00000534602 Q7L0L9 218 aa25.06■■□□□ 1.6
GSDMD-216ENST00000534602 CYB5R4Q7L1T6 521 aa25.06■■□□□ 1.6
GSDMD-216ENST00000534602 MCF2L2Q86YR7 1114 aa25.06■■□□□ 1.6
GSDMD-216ENST00000534602 JMJD4Q9H9V9 463 aa25.06■■□□□ 1.6
GSDMD-216ENST00000534602 NKRFO15226 690 aaKnown RBP eCLIP25.05■■□□□ 1.6
GSDMD-216ENST00000534602 CD4P01730 458 aa25.05■■□□□ 1.6
GSDMD-216ENST00000534602 ITGA7Q13683 1181 aa25.05■■□□□ 1.6
GSDMD-216ENST00000534602 TMEM63BQ5T3F8 832 aa25.05■■□□□ 1.6
GSDMD-216ENST00000534602 MFSD5Q6N075 450 aa25.05■■□□□ 1.6
GSDMD-216ENST00000534602 FBXO11Q86XK2 927 aa25.05■■□□□ 1.6
GSDMD-216ENST00000534602 SCFD2Q8WU76 684 aa25.05■■□□□ 1.6
GSDMD-216ENST00000534602 MRPL11Q9Y3B7 192 aaKnown RBP25.05■■□□□ 1.6
GSDMD-216ENST00000534602 DHX16O60231 1041 aaKnown RBP25.04■■□□□ 1.6
GSDMD-216ENST00000534602 EPHB4P54760 987 aa25.04■■□□□ 1.6
GSDMD-216ENST00000534602 MAP4K1Q92918 833 aa25.04■■□□□ 1.6
GSDMD-216ENST00000534602 PALM3A6NDB9 673 aaPredicted RBP25.03■■□□□ 1.6
GSDMD-216ENST00000534602 KLRF2D3W0D1 207 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 PTGS1P23219 599 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 CPT1AP50416 773 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 SMAD3P84022 425 aaKnown RBP25.03■■□□□ 1.6
GSDMD-216ENST00000534602 RALYLQ86SE5 291 aaKnown RBP25.03■■□□□ 1.6
GSDMD-216ENST00000534602 NCOA7Q8NI08 942 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 MTMR8Q96EF0 704 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 AMNQ9BXJ7 453 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 VAT1LQ9HCJ6 419 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 POLR3EQ9NVU0 708 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 STXBP5LQ9Y2K9 1186 aa25.03■■□□□ 1.6
GSDMD-216ENST00000534602 ERICH2A1L162 156 aa25.02■■□□□ 1.6
GSDMD-216ENST00000534602 E7EWF7 191 aa25.02■■□□□ 1.6
GSDMD-216ENST00000534602 SART3Q15020 963 aaKnown RBP25.02■■□□□ 1.6
GSDMD-216ENST00000534602 PPP2R5BQ15173 497 aa25.02■■□□□ 1.6
GSDMD-216ENST00000534602 BRDTQ58F21 947 aaPredicted RBP25.02■■□□□ 1.6
GSDMD-216ENST00000534602 STAG2Q8N3U4 1231 aa25.02■■□□□ 1.6
GSDMD-216ENST00000534602 SYTL5Q8TDW5 730 aaPredicted RBP25.02■■□□□ 1.6
GSDMD-216ENST00000534602 NSUN6Q8TEA1 469 aaKnown RBP25.02■■□□□ 1.6
GSDMD-216ENST00000534602 MAD2L2Q9UI95 211 aa25.02■■□□□ 1.6
GSDMD-216ENST00000534602 GRIN2DO15399 1336 aa25.02■■□□□ 1.6
GSDMD-216ENST00000534602 IFIT3O14879 490 aaKnown RBP25.01■■□□□ 1.59
GSDMD-216ENST00000534602 PPIGQ13427 754 aaKnown RBP eCLIP25.01■■□□□ 1.592e-8■■■□□ 17.4
GSDMD-216ENST00000534602 TMEM199Q8N511 208 aa25.01■■□□□ 1.59
GSDMD-216ENST00000534602 TBC1D5Q92609 795 aa25.01■■□□□ 1.59
GSDMD-216ENST00000534602 RNPC3Q96LT9 517 aaKnown RBP25.01■■□□□ 1.59
GSDMD-216ENST00000534602 IWS1Q96ST2 819 aa25.01■■□□□ 1.59
GSDMD-216ENST00000534602 MYH6P13533 1939 aa25■■□□□ 1.59
GSDMD-216ENST00000534602 GHRHRQ02643 423 aa25■■□□□ 1.59
GSDMD-216ENST00000534602 TRAF1Q13077 416 aa25■■□□□ 1.59
GSDMD-216ENST00000534602 TTLL4Q14679 1199 aa25■■□□□ 1.59
GSDMD-216ENST00000534602 OR6J1Q8NGC5 347 aa25■■□□□ 1.59
GSDMD-216ENST00000534602 MAP3K20Q9NYL2 800 aaKnown RBP25■■□□□ 1.59
GSDMD-216ENST00000534602 COL6A3P12111 3177 aa25■■□□□ 1.59
GSDMD-216ENST00000534602 A6NJR5 290 aa24.99■■□□□ 1.59
GSDMD-216ENST00000534602 ZBTB5O15062 677 aa24.99■■□□□ 1.59
GSDMD-216ENST00000534602 KPNA6O60684 536 aa24.99■■□□□ 1.59
GSDMD-216ENST00000534602 TXNP10599 105 aaKnown RBP24.99■■□□□ 1.59
GSDMD-216ENST00000534602 PURAQ00577 322 aaKnown RBP24.99■■□□□ 1.59
GSDMD-216ENST00000534602 GRM4Q14833 912 aa24.99■■□□□ 1.59
GSDMD-216ENST00000534602 WTAPQ15007 396 aa24.99■■□□□ 1.59
GSDMD-216ENST00000534602 ZNF697Q5TEC3 545 aa24.99■■□□□ 1.59
GSDMD-216ENST00000534602 SAMD3Q8N6K7 520 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms