RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 KIR3DS1Q14943 382 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 INF2Q27J81 1249 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 ACBD5Q5T8D3 534 aaPredicted RBP9.51□□□□□ -0.89
CASP4-213ENST00000534356 USP53Q70EK8 1073 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 ATG4DQ86TL0 474 aaPredicted RBP9.51□□□□□ -0.89
CASP4-213ENST00000534356 JAMLQ86YT9 394 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 PLCD4Q9BRC7 762 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 TMEM260Q9NX78 707 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 AFMP43652 599 aa9.5□□□□□ -0.89
CASP4-213ENST00000534356 TESK1Q15569 626 aa9.5□□□□□ -0.89
CASP4-213ENST00000534356 E4F1Q66K89 784 aaPredicted RBP9.5□□□□□ -0.89
CASP4-213ENST00000534356 NLGN1Q8N2Q7 840 aa9.5□□□□□ -0.89
CASP4-213ENST00000534356 DIO2Q92813 273 aa9.5□□□□□ -0.89
CASP4-213ENST00000534356 C7orf72A4D263 438 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 WTIPA6NIX2 430 aaPredicted RBP9.49□□□□□ -0.89
CASP4-213ENST00000534356 GALK1P51570 392 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 SUMO1P63165 101 aaKnown RBP9.49□□□□□ -0.89
CASP4-213ENST00000534356 IQCEQ6IPM2 695 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 ABHD4Q8TB40 342 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 SHISA4Q96DD7 197 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 IMPACTQ9P2X3 320 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 GPR160Q9UJ42 338 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 NPFFR2Q9Y5X5 522 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 TAF6LQ9Y6J9 622 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 RB1CC1Q8TDY2 1594 aa9.49□□□□□ -0.89
CASP4-213ENST00000534356 C6orf222P0C671 652 aaPredicted RBP9.48□□□□□ -0.89
CASP4-213ENST00000534356 LCP1P13796 627 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 LTBRP36941 435 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 LILRA2Q8N149 483 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 ASIC4Q96FT7 647 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 KIRREL1Q96J84 757 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 FANCLQ9NW38 375 aa9.48□□□□□ -0.89
CASP4-213ENST00000534356 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
CASP4-213ENST00000534356 PPP1R11O60927 126 aaPredicted RBP9.47□□□□□ -0.89
CASP4-213ENST00000534356 KCNAB2Q13303 367 aa9.47□□□□□ -0.89
CASP4-213ENST00000534356 KCNT2Q6UVM3 1135 aa9.47□□□□□ -0.89
CASP4-213ENST00000534356 NLRX1Q86UT6 975 aa9.47□□□□□ -0.89
CASP4-213ENST00000534356 RCBTB1Q8NDN9 531 aa9.47□□□□□ -0.89
CASP4-213ENST00000534356 RNF32Q9H0A6 362 aa9.47□□□□□ -0.89
CASP4-213ENST00000534356 ACSL6Q9UKU0 697 aa9.47□□□□□ -0.89
CASP4-213ENST00000534356 CCDC163A0A0D9SF12 145 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 NPHS1O60500 1241 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 MSL3P1P0C860 447 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 PRKCAP17252 672 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 IRAK1P51617 712 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 MVKQ03426 396 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 SIRT2Q8IXJ6 389 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 NUP43Q8NFH3 380 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 DCAF4Q8WV16 495 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 DPF3Q92784 378 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 GULP1Q9UBP9 304 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 ASXL2Q76L83 1435 aa9.46□□□□□ -0.9
CASP4-213ENST00000534356 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.45□□□□□ -0.9
CASP4-213ENST00000534356 PPP1R12AO14974 1030 aaPredicted RBP9.45□□□□□ -0.9
CASP4-213ENST00000534356 MSCO60682 206 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 PAPLNO95428 1278 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 ITGB5P18084 799 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 SNX17Q15036 470 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 HOMER1Q86YM7 354 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 APPBP2Q92624 585 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 GPR27Q9NS67 375 aa9.45□□□□□ -0.9
CASP4-213ENST00000534356 A0A1W2PQ27 194 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 A0A1W2PQ64 194 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 A0A1W2PQC6 194 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 A0A1W2PQD8 194 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 BIN1O00499 593 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
CASP4-213ENST00000534356 ASMTLO95671 621 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 SDE2Q6IQ49 451 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 NCOA5Q9HCD5 579 aaKnown RBP9.44□□□□□ -0.9
CASP4-213ENST00000534356 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 RWDD3Q9Y3V2 267 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 TRAF6Q9Y4K3 522 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 PCDHA2Q9Y5H9 948 aa9.44□□□□□ -0.9
CASP4-213ENST00000534356 TIMM13Q9Y5L4 95 aaPredicted RBP9.44□□□□□ -0.9
CASP4-213ENST00000534356 CDC45O75419 566 aa9.43□□□□□ -0.9
CASP4-213ENST00000534356 CORO7P57737 925 aa9.43□□□□□ -0.9
CASP4-213ENST00000534356 CBX2Q14781 532 aaPredicted RBP9.43□□□□□ -0.9
CASP4-213ENST00000534356 RSPO2Q6UXX9 243 aaPredicted RBP9.43□□□□□ -0.9
CASP4-213ENST00000534356 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
CASP4-213ENST00000534356 KRTAP9-2Q9BYQ4 174 aa9.43□□□□□ -0.9
CASP4-213ENST00000534356 BTG4Q9NY30 223 aa9.43□□□□□ -0.9
CASP4-213ENST00000534356 FBLN5Q9UBX5 448 aa9.43□□□□□ -0.9
CASP4-213ENST00000534356 ENPP3O14638 875 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 TACR1P25103 407 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 BCL6P41182 706 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 GABREP78334 506 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 CYP4F8P98187 520 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 KCNMB1Q16558 191 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 ZSWIM9Q86XI8 627 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 CRTAC1Q9NQ79 661 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 PDLIM7Q9NR12 457 aa9.42□□□□□ -0.9
CASP4-213ENST00000534356 YBX2Q9Y2T7 364 aaKnown RBP9.42□□□□□ -0.9
CASP4-213ENST00000534356 UNC13AQ9UPW8 1703 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms